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L3_132_000M1_scaffold_248

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_248_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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104..643
DNA (540bp) protein (180aa)
Transcriptional regulator, LuxR family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R248_9BACE
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Uncharacterized protein {ECO:0000313|EMBL:EIY61922.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_132_000M1_scaffold_248_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(718..1410)
DNA (693bp) protein (231aa)
Predicted hydrolase (HAD superfamily) n=5 Tax=Bacteroides RepID=D6D8B1_9BACE
Predicted hydrolase (HAD superfamily)
Uncharacterized protein {ECO:0000313|EMBL:EIY55707.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_132_000M1_scaffold_248_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1594..2661
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YFL2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61920.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Smr domain./Domain of unknown function (DUF2027).
L3_132_000M1_scaffold_248_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2725..3081)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HP12_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61919.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_132_000M1_scaffold_248_5
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3199..3402
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K5U3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37926.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_132_000M1_scaffold_248_6
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3374..3982)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5CEY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS33152.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Predicted membrane protein
L3_132_000M1_scaffold_248_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3979..4266)
DNA (288bp) protein (96aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LZ94_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61917.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Membrane protein of unknown function (DUF340).
L3_132_000M1_scaffold_248_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4269..5045)
DNA (777bp) protein (259aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9SZP3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99565.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_132_000M1_scaffold_248_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5036..6034)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YFK7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61915.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_132_000M1_scaffold_248_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6042..8744)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HP09_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61914.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_132_000M1_scaffold_248_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8746..9624)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5CEY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY61913.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Fe2+-dicitrate sensor, membrane component
L3_132_000M1_scaffold_248_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9651..10085)
DNA (435bp) protein (145aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LZ99_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11272.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_132_000M1_scaffold_248_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10173..10727)
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SZP0_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY61911.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_132_000M1_scaffold_248_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10747..11877)
DNA (1131bp) protein (377aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YFK3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61910.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_132_000M1_scaffold_248_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12426..14582
DNA (2157bp) protein (719aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor G n=4 Tax=Bacteroides RepID=E5CEX7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99572.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_132_000M1_scaffold_248_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14916..16472
DNA (1557bp) protein (519aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Sensor protein RprX n=4 Tax=Bacteroides RepID=D7K5V4_9BACE
L3_132_000M1_scaffold_248_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16474..17175
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=14 Tax=Bacteroides RepID=D6D8C4_9BACE
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Transcriptional regulatory protein rprY {ECO:0000313|EMBL:EIY61907.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_132_000M1_scaffold_248_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17254..17430)
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=E5CEX4_9BACE
Putative membrane protein {ECO:0000313|EMBL:KDS17428.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L3_132_000M1_scaffold_248_19
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17571..18017)
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=16 Tax=Bacteroides RepID=D6D8C6_9BACE
transcriptional regulator, MarR family
MarR family transcriptional regulator {ECO:0000313|EMBL:EFI11770.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_132_000M1_scaffold_248_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18178..18522
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=4 Tax=Bacteroides RepID=D7K5V8_9BACE
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
SSU ribosomal protein S6P
L3_132_000M1_scaffold_248_21
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18525..18797
DNA (273bp) protein (91aa)
30S ribosomal protein S18 n=16 Tax=Bacteroides RepID=D6D8C8_9BACE
SSU ribosomal protein S18P
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_132_000M1_scaffold_248_22
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18812..19255
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=9 Tax=Bacteroides RepID=D6D8C9_9BACE
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_132_000M1_scaffold_248_23
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19337..21001
DNA (1665bp) protein (555aa)
Transcriptional regulator n=3 Tax=Bacteroides RepID=D7K5W1_9BACE
Transcriptional regulator {ECO:0000313|EMBL:EFI37944.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_132_000M1_scaffold_248_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21240..22352
DNA (1113bp) protein (371aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=E5CEW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99581.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Predicted dehydrogenases and related proteins
L3_132_000M1_scaffold_248_25
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22365..23852
DNA (1488bp) protein (496aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=E5CEW7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS33133.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Predicted dehydrogenases and related proteins
L3_132_000M1_scaffold_248_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23891..24757
DNA (867bp) protein (289aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A7LZB4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99583.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Domain of Unknown Function (DUF1080).
L3_132_000M1_scaffold_248_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24903..25811
DNA (909bp) protein (303aa)
AP endonuclease, family 2 n=4 Tax=Bacteroides RepID=A7LZB5_BACOV
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:KDS17419.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Xylose isomerase-like TIM barrel.
L3_132_000M1_scaffold_248_28
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25900..26121)
DNA (222bp) protein (74aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=C3QG78_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO50962.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_132_000M1_scaffold_248_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26281..27954)
DNA (1674bp) protein (558aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Uncharacterized protein n=3 Tax=Bacteroides RepID=E5CEW3_9BACE
AMP-binding enzyme family protein {ECO:0000313|EMBL:KDS12236.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_132_000M1_scaffold_248_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28065..29384
DNA (1320bp) protein (440aa)
MiaB-like tRNA modifying enzyme n=3 Tax=Bacteroides RepID=E5CEW2_9BACE
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EIY61894.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
MiaB-like tRNA modifying enzyme
Displaying items 1-30 of 46 in total

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