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L3_132_000M1_scaffold_950

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_950_1
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(101..460)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6VWU5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB25772.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_132_000M1_scaffold_950_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(479..898)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6VWU4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB25771.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_132_000M1_scaffold_950_3
unknown

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comp(849..953)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_132_000M1_scaffold_950_4
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1053..1580
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9K9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV26452.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
gepA; Genetic Element protein A
L3_132_000M1_scaffold_950_5
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1573..1947
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9L0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV26453.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_132_000M1_scaffold_950_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2261..2848
DNA (588bp) protein (196aa)
RNA polymerase sigma-70 factor, expansion family 1 n=4 Tax=Bacteroides fragilis RepID=I9BFK5_BACFG
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:KDS56496.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
putative RNA polymerase ECF-type sigma factor
L3_132_000M1_scaffold_950_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2933..3886
DNA (954bp) protein (318aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I9BEM4_BACFG
FecR family protein {ECO:0000313|EMBL:KDS56495.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
putative anti-sigma factor
L3_132_000M1_scaffold_950_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4030..7422
DNA (3393bp) protein (1131aa)
SusC/RagA family TonB-linked outer membrane protein n=7 Tax=Bacteroides fragilis RepID=I3HQ34_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKA85958.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative outer membrane protein
L3_132_000M1_scaffold_950_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7433..9070
DNA (1638bp) protein (546aa)
Putative outer membrane protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LF81_BACFN
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS56493.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
putative outer membrane protein
L3_132_000M1_scaffold_950_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9168..10727
DNA (1560bp) protein (520aa)
Conserved hypothetical exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LF82_BACFN
Uncharacterized protein {ECO:0000313|EMBL:KDS56492.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_132_000M1_scaffold_950_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11135..11479
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPL8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64880.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_132_000M1_scaffold_950_12
unknown

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11657..11839
DNA (183bp) protein (61aa)

This feature has no annotations

L3_132_000M1_scaffold_950_13
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12233..13897)
DNA (1665bp) protein (555aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides RepID=C6Z4X2_9BACE
Glycoside hydrolase family 43 {ECO:0000313|EMBL:EFV65455.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
beta-xylosidase/alpha-L-arabinofuranosidase
L3_132_000M1_scaffold_950_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13911..15125)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UGT8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS56489.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_132_000M1_scaffold_950_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15264..16883)
DNA (1620bp) protein (540aa)
Glycoside hydrolase family 28 n=4 Tax=Bacteroides RepID=A6L1U3_BACV8
glycoside hydrolase
Glycoside hydrolase family 28 {ECO:0000313|EMBL:EFV65457.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_132_000M1_scaffold_950_16
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17260..18117
DNA (858bp) protein (286aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=14 Tax=Bacteroides RepID=A6L1U4_BACV8
enoyl-(acyl carrier protein) reductase
L3_132_000M1_scaffold_950_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18125..19126
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=R9H032_BACVU
Gliding motility-associated lipoprotein GldB {ECO:0000313|EMBL:EFV65459.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_132_000M1_scaffold_950_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19147..19725
DNA (579bp) protein (193aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1U6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17240.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_132_000M1_scaffold_950_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19821..20810)
DNA (990bp) protein (330aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L1U7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17239.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_132_000M1_scaffold_950_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20868..21722)
DNA (855bp) protein (285aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate synthase {ECO:0000255|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000255|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000255|HAMAP-Rule:MF_00206}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Lipoyl synthase n=4 Tax=Bacteroides RepID=LIPA_BACV8
lipoyl synthase
L3_132_000M1_scaffold_950_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21821..24022)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UFZ4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81426.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
dipeptidyl peptidase IV
L3_132_000M1_scaffold_950_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24109..25035
DNA (927bp) protein (309aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L1V0_BACV8
hypothetical protein
Radical SAM superfamily protein {ECO:0000313|EMBL:KDS56480.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_132_000M1_scaffold_950_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25051..26238
DNA (1188bp) protein (396aa)
Flavoprotein n=7 Tax=Bacteroides RepID=A6L1V1_BACV8
flavoprotein
Flavoprotein {ECO:0000313|EMBL:CDF17235.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_132_000M1_scaffold_950_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26334..27167)
DNA (834bp) protein (278aa)
Putative transport protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1V2_BACV8
transporter
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:KDS27292.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_132_000M1_scaffold_950_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27216..27830)
DNA (615bp) protein (205aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L1V3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV65468.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_132_000M1_scaffold_950_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27837..28916)
DNA (1080bp) protein (360aa)
Helicase n=5 Tax=Bacteroides RepID=E5UZN1_9BACE
Helicase {ECO:0000313|EMBL:CDF17232.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
helicase
L3_132_000M1_scaffold_950_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28967..29782)
DNA (816bp) protein (272aa)
Putative helicase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1V4_BACV8
helicase
TPR repeat family protein {ECO:0000313|EMBL:KDS27290.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_132_000M1_scaffold_950_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30354..31304
DNA (951bp) protein (317aa)
SPFH/Band 7/PHB domain protein n=7 Tax=Bacteroides RepID=C6Z4V8_9BACE
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOR97371.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 28 items

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