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L3_132_000M1_scaffold_1483

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_1483_1
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(315..1436)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UR69_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51974.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hydrogenase formation HypD protein
L3_132_000M1_scaffold_1483_2
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1692..2177
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=3 Tax=Desulfovibrio vulgaris RepID=A1V9X7_DESVV
AsnC family transcriptional regulator
Heme biosynthesis protein, putative {ECO:0000313|EMBL:AAS97637.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
L3_132_000M1_scaffold_1483_3
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2174..3448
DNA (1275bp) protein (425aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA-AT {ECO:0000255|HAMAP-Rule:MF_00375};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=GSA_DESVM
glutamate-1-semialdehyde aminotransferase
L3_132_000M1_scaffold_1483_4
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4173..5099)
DNA (927bp) protein (309aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ACL08076.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ACL08076.1};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DKB4_DESVM
L3_132_000M1_scaffold_1483_5
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5388..6296)
DNA (909bp) protein (303aa)
Sirohydrochlorin cobaltochelatase {ECO:0000256|PIRNR:PIRNR033579}; EC=4.99.1.3 {ECO:0000256|PIRNR:PIRNR033579};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UUX5_9DELT
anaerobic cobalt chelatase
L3_132_000M1_scaffold_1483_6
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6998..8047
DNA (1050bp) protein (350aa)
TRAP transporter solute receptor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MFF9_9RHIZ
dctP; TRAP system periplasmic protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
L3_132_000M1_scaffold_1483_7
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8288..9076)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y822_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW45514.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
phage repressor
L3_132_000M1_scaffold_1483_8

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9174..9635
DNA (462bp) protein (154aa)
DNA-binding protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FA1B
Uncultured bacterium extrachromosomal DNA RGI00403 {ECO:0000313|EMBL:CDL66020.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
helix-turn-helix domain-containing protein
L3_132_000M1_scaffold_1483_9
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9855..10103
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Nocardiopsis lucentensis RepID=UPI000346E196
putative DNA-binding protein
Transcriptional regulator {ECO:0000313|EMBL:ETM65955.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
L3_132_000M1_scaffold_1483_10
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10140..10769)
DNA (630bp) protein (210aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
Molybdenum cofactor guanylyltransferase n=1 Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J4K5_DESDA
molybdopterin-guanine dinucleotide biosynthesis protein A
L3_132_000M1_scaffold_1483_11
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10780..12414)
DNA (1635bp) protein (545aa)
Formylmethanofuran dehydrogenase, subunit E n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VH88_DESVV
formylmethanofuran dehydrogenase subunit E
Tungsten formylmethanofuran dehydrogenase family protein/molybdopterin binding protein {ECO:0000313|EMBL:AAS94659.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
L3_132_000M1_scaffold_1483_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12728..13339
DNA (612bp) protein (204aa)
Extracellular metalloproteinase, serralysin family n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K2H6_PSEFL
Extracellular metalloproteinase, serralysin family {ECO:0000313|EMBL:EIK58916.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
hypothetical protein
Displaying 12 items

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