ggKbase home page

L3_132_000M1_scaffold_791

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_791_1
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


40..330
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=2 Tax=Desulfovibrio RepID=RL23_DESVM
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
L3_132_000M1_scaffold_791_2
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


334..1164
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=RL2_DESVM
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
L3_132_000M1_scaffold_791_3
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1177..1461
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A0B995
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
L3_132_000M1_scaffold_791_4
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1474..1812
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B64A1D
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
L3_132_000M1_scaffold_791_5
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1816..2457
DNA (642bp) protein (214aa)
30S ribosomal protein S3 n=2 Tax=Bilophila RepID=E5Y770_BILWA
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rpsC; 30S ribosomal protein S3
L3_132_000M1_scaffold_791_6
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2457..2876
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=2 Tax=Bilophila RepID=E5Y769_BILWA
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rplP; 50S ribosomal protein L16
L3_132_000M1_scaffold_791_7
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2873..3085
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=2 Tax=Bilophila RepID=E5Y768_BILWA
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
50S ribosomal protein L29
L3_132_000M1_scaffold_791_8
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3095..3361
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00035E1AE5
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
30S ribosomal protein S17
L3_132_000M1_scaffold_791_9
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3374..3742
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Desulfovibrio vulgaris RepID=RL14_DESVH
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
L3_132_000M1_scaffold_791_10
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3756..4097
DNA (342bp) protein (114aa)
50S ribosomal protein L24 n=3 Tax=Desulfovibrio vulgaris RepID=RL24_DESVH
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
L3_132_000M1_scaffold_791_11
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4111..4650
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Bilophila RepID=E5Y764_BILWA
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rplE; 50S ribosomal protein L5
L3_132_000M1_scaffold_791_12
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4663..4848
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GEE9_DESGI
putative 30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
L3_132_000M1_scaffold_791_13
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4881..5261
DNA (381bp) protein (127aa)
30S ribosomal protein S8 n=2 Tax=Desulfovibrio RepID=D9YGS7_9DELT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
rpsH; 30S ribosomal protein S8
L3_132_000M1_scaffold_791_14
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5329..5853
DNA (525bp) protein (175aa)
50S ribosomal protein L6 n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1L5_9DELT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rplF; 50S ribosomal protein L6
L3_132_000M1_scaffold_791_15
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5865..6224
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Bilophila RepID=E5Y760_BILWA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rplR; 50S ribosomal protein L18
L3_132_000M1_scaffold_791_16
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6260..6763
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=2 Tax=Bilophila RepID=E5Y759_BILWA
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
30S ribosomal protein S5
L3_132_000M1_scaffold_791_17
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6782..6961
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=2 Tax=Bilophila RepID=E5Y758_BILWA
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rpmD; 50S ribosomal protein L30
L3_132_000M1_scaffold_791_18
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6958..7470
DNA (513bp) protein (171aa)
50S ribosomal protein L15 n=2 Tax=Bilophila RepID=E5Y757_BILWA
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
50S ribosomal protein L15
L3_132_000M1_scaffold_791_19
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7474..8790
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y756_BILWA
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
secY; preprotein translocase subunit SecY
L3_132_000M1_scaffold_791_20
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8793..9572
DNA (780bp) protein (260aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
Methionine aminopeptidase n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JL25_DESDE
methionine aminopeptidase
L3_132_000M1_scaffold_791_21
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9694..9807
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=Desulfovibrionaceae RepID=RL36_DESDA
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_132_000M1_scaffold_791_22
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9826..10194
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Desulfovibrio sp. A2 RepID=G2H2U5_9DELT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
rpsM; 30S ribosomal protein S13
L3_132_000M1_scaffold_791_23
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10267..10656
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=2 Tax=Bilophila RepID=E5Y752_BILWA
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
30S ribosomal protein S11
L3_132_000M1_scaffold_791_24
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10684..11310
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=2 Tax=Bilophila RepID=E5Y751_BILWA
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
30S ribosomal protein S4
L3_132_000M1_scaffold_791_25
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11323..12366
DNA (1044bp) protein (348aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UQE2_9DELT
DNA-directed RNA polymerase subunit alpha
L3_132_000M1_scaffold_791_26
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12356..12751
DNA (396bp) protein (132aa)
50S ribosomal protein L17 n=3 Tax=Desulfovibrio vulgaris RepID=RL17_DESVH
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
L3_132_000M1_scaffold_791_27
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13066..13830)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9C8_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO29804.1}; TaxID=556269 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
lipoprotein
L3_132_000M1_scaffold_791_28
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14232..15332
DNA (1101bp) protein (367aa)
segregation protein A n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B3E876
selenide, water dikinase
Selenide, water dikinase {ECO:0000313|EMBL:ACL48597.1}; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
L3_132_000M1_scaffold_791_29
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15469..15861
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HDG3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGY23992.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
hypothetical protein
L3_132_000M1_scaffold_791_30
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16116..17195)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1USK2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51366.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
radical SAM protein
Displaying items 1-30 of 36 in total

View Taxonomy