ggKbase home page

L3_132_000M1_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_324_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(235..1872)
DNA (1638bp) protein (546aa)
Amidohydrolase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFZ8_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:CDA35474.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amidohydrolase
L3_132_000M1_scaffold_324_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2041..3504
DNA (1464bp) protein (488aa)
Amidohydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E998_9ACTN
Amidohydrolase {ECO:0000313|EMBL:EBA39843.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amidohydrolase
L3_132_000M1_scaffold_324_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3636..4985)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E996_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39840.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
fibronectin type III domain-containing protein
L3_132_000M1_scaffold_324_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5076..6098)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E994_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39839.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_132_000M1_scaffold_324_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6307..6828)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A308_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35497.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_132_000M1_scaffold_324_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6873..7250)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMG6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74688.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_132_000M1_scaffold_324_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7243..7788)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9I6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35495.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_132_000M1_scaffold_324_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7955..8761)
DNA (807bp) protein (269aa)
Probable transcriptional regulatory protein COLAER_00981 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E989_9ACTN
Probable transcriptional regulatory protein COLAER_00981 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_132_000M1_scaffold_324_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8927..11110)
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z731_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74691.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_132_000M1_scaffold_324_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11185..12006)
DNA (822bp) protein (274aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E985_9ACTN
prolipoprotein diacylglyceryl transferase
L3_132_000M1_scaffold_324_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12116..12394)
DNA (279bp) protein (93aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZME7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74693.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
nitrogen-fixing NifU domain-containing protein
L3_132_000M1_scaffold_324_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12565..13089)
DNA (525bp) protein (175aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E983_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74694.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
deoxycytidylate deaminase
L3_132_000M1_scaffold_324_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13174..14025)
DNA (852bp) protein (284aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Type III pantothenate kinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZG20_9ACTN
transcriptional activator, Baf family
L3_132_000M1_scaffold_324_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14310..16013
DNA (1704bp) protein (568aa)
Putative oligopeptide transporter OPT family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z725_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74696.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
oligopeptide transporter
L3_132_000M1_scaffold_324_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16214..19669)
DNA (3456bp) protein (1152aa)
SCP-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E980_9ACTN
SCP-like protein {ECO:0000313|EMBL:EBA39825.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
TPR repeat-containing protein
L3_132_000M1_scaffold_324_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19977..21116
DNA (1140bp) protein (380aa)
Hydrophobic domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E978_9ACTN
Hydrophobic domain protein {ECO:0000313|EMBL:EBA39824.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_132_000M1_scaffold_324_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21131..21571)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDS1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:KGI74699.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
arylsulfate sulfotransferase
L3_132_000M1_scaffold_324_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21689..22648)
DNA (960bp) protein (320aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZW45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI74700.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
3-hydroxybutyryl-CoA dehydrogenase
L3_132_000M1_scaffold_324_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23067..27848)
DNA (4782bp) protein (1594aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA20_9ACTN
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDA35695.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
CoA-substrate-specific enzyme activase
L3_132_000M1_scaffold_324_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27860..28570)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZMX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74542.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
TetR family transcriptional regulator
L3_132_000M1_scaffold_324_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29443..30300)
DNA (858bp) protein (286aa)
HAD hydrolase, family IIB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E966_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74543.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HAD-superfamily hydrolase
L3_132_000M1_scaffold_324_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30388..30726)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E963_9ACTN
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KGI74546.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
nitrogen regulatory protein
L3_132_000M1_scaffold_324_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30934..32115)
DNA (1182bp) protein (394aa)
Ammonium transporter n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E962_9ACTN
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ammonium transporter protein
L3_132_000M1_scaffold_324_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32275..33294)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMX5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74548.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_132_000M1_scaffold_324_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33298..33834)
DNA (537bp) protein (179aa)
HD domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E960_9ACTN
HD domain protein {ECO:0000313|EMBL:EBA39805.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
metal dependent phosphohydrolase
L3_132_000M1_scaffold_324_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34063..35844
DNA (1782bp) protein (594aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7N6_9ACTN
L3_132_000M1_scaffold_324_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36302..37297
DNA (996bp) protein (332aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E958_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39803.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter substrate-binding protein
L3_132_000M1_scaffold_324_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37436..38095
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E957_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39802.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter
L3_132_000M1_scaffold_324_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38092..38925
DNA (834bp) protein (278aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMY0_9ACTN
ABC transporter permease protein {ECO:0000313|EMBL:CDA35706.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter
L3_132_000M1_scaffold_324_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38962..39726
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E955_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39800.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter ATP-binding protein
Displaying items 1-30 of 31 in total

View Taxonomy