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L3_132_000M1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_12_1
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(217..759)
DNA (543bp) protein (181aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
yfcE2; phosphodiesterase YfcE (EC:3.1.4.-)
MJ0936 family phosphodiesterase n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PXC0_9FUSO
L3_132_000M1_scaffold_12_2
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(792..1961)
DNA (1170bp) protein (390aa)
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:EES63376.1}; EC=1.1.1.- {ECO:0000313|EMBL:EES63376.1};; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
NADH-dependent butanol dehydrogenase A n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JR33_FUSVA
iron-containing alcohol dehydrogenase
L3_132_000M1_scaffold_12_3
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(2160..2999)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PTB7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS27273.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_132_000M1_scaffold_12_4
unknown

Not on your lists

3169..3330
DNA (162bp) protein (54aa)

This feature has no annotations

L3_132_000M1_scaffold_12_5
unknown

Not on your lists

comp(3445..3633)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_132_000M1_scaffold_12_6
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

3767..4804
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PRG7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO82980.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
threonine aldolase
L3_132_000M1_scaffold_12_7
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(4855..5343)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V9T1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERT68241.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
hypothetical protein
L3_132_000M1_scaffold_12_8
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(5356..6405)
DNA (1050bp) protein (350aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCB5_FUSMR
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
L3_132_000M1_scaffold_12_9
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6421..6693)
DNA (273bp) protein (91aa)
Septum formation initiator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCB4_FUSMR
Septum formation initiator {ECO:0000313|EMBL:EEO35520.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
septum formation initiator
L3_132_000M1_scaffold_12_10
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6706..7227)
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VBT8_9FUSO
L3_132_000M1_scaffold_12_11
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(7246..9561)
DNA (2316bp) protein (772aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Primosomal protein N n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQJ7_FUSVA
primosomal protein N'
L3_132_000M1_scaffold_12_12
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9571..11727)
DNA (2157bp) protein (719aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PUE0_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO80355.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
L3_132_000M1_scaffold_12_13
unknown

Not on your lists

11799..12260
DNA (462bp) protein (154aa)

This feature has no annotations

L3_132_000M1_scaffold_12_14
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(12316..13677)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAP2_FUSMR
MATE efflux family protein {ECO:0000313|EMBL:EEO34929.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
MATE efflux family protein
L3_132_000M1_scaffold_12_15
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(13875..17441)
DNA (3567bp) protein (1189aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDB8_FUSMR
pyruvate:ferredoxin (flavodoxin) oxidoreductase
L3_132_000M1_scaffold_12_16
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(17613..18815)
DNA (1203bp) protein (401aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Acetate kinase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQE9_FUSVA
acetate kinase
L3_132_000M1_scaffold_12_17
Fusobacterium gonidiaformans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(18877..19914)
DNA (1038bp) protein (346aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EFS21387.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EFS21387.1};; TaxID=469605 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium gonidiaformans 3-1-5R.;"
Phosphate acetyltransferase n=1 Tax=Fusobacterium gonidiaformans ATCC 25563 RepID=E5BZ19_9FUSO
phosphate acetyltransferase
L3_132_000M1_scaffold_12_18
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(20100..21248)
DNA (1149bp) protein (383aa)
Signal recognition particle receptor FtsY n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VBZ1_9FUSO
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
signal recognition particle-docking protein FtsY
L3_132_000M1_scaffold_12_19
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21400..21705
DNA (306bp) protein (102aa)
UPF0265 protein FMAG_00391 n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAE2_FUSMR
UPF0265 protein FMAG_00391 {ECO:0000256|HAMAP-Rule:MF_00683}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
hypothetical protein
L3_132_000M1_scaffold_12_20
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21716..22309
DNA (594bp) protein (198aa)
Recombination protein RecR n=2 Tax=Fusobacterium ulcerans RepID=H1PR51_9FUSO
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
recombination protein RecR
L3_132_000M1_scaffold_12_21
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

22413..23894
DNA (1482bp) protein (494aa)
adenosine deaminase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C8201
adenosine deaminase
Adenosine deaminase {ECO:0000313|EMBL:AIE86616.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
L3_132_000M1_scaffold_12_22
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(23952..24941)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQ51_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES62443.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
integral membrane protein
L3_132_000M1_scaffold_12_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24975..28052)
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98010.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_132_000M1_scaffold_12_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28194..28556
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LXK5_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR35085.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_132_000M1_scaffold_12_25
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

28762..29466
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEK5_FUSMR
Uncharacterized protein {ECO:0000313|EMBL:EEO36311.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
hypothetical protein
L3_132_000M1_scaffold_12_26
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

29466..30176
DNA (711bp) protein (237aa)
Putative membrane protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG26_FUSMR
Putative membrane protein {ECO:0000313|EMBL:EEO36832.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
transporter
L3_132_000M1_scaffold_12_27
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists


comp(30321..30578)
DNA (258bp) protein (86aa)
30S ribosomal protein S15 n=15 Tax=Fusobacterium RepID=R9RBY6_FUSNU
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=999414 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis F0419.;"
L3_132_000M1_scaffold_12_28
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(30696..32927)
DNA (2232bp) protein (744aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.- 3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Fusobacterium ulcerans RepID=H1PPA5_9FUSO
L3_132_000M1_scaffold_12_29
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(32920..34263)
DNA (1344bp) protein (448aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
tRNA(Ile)-lysidine synthase n=2 Tax=Fusobacterium ulcerans RepID=H1PPA6_9FUSO
tRNA(Ile)-lysidine synthetase
L3_132_000M1_scaffold_12_30
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(34297..35955)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HFJ5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26921.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
radical SAM protein
Displaying items 1-30 of 120 in total

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