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L3_132_000M1_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_237_1
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(123..2192)
DNA (2070bp) protein (690aa)
Amylopullulanase Apu n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AY42_CLOA9
alpha amylase catalytic region
Alpha amylase catalytic region {ECO:0000313|EMBL:AKA69798.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_132_000M1_scaffold_237_2
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(2220..4652)
DNA (2433bp) protein (811aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
Glycogen phosphorylase n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V4R2_9FUSO
glycogen/starch/alpha-glucan phosphorylase
L3_132_000M1_scaffold_237_3
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(4697..6127)
DNA (1431bp) protein (477aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
Glycogen synthase n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V586_9FUSO
glycogen/starch synthase, ADP-glucose type
L3_132_000M1_scaffold_237_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6164..7276)
DNA (1113bp) protein (371aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D4D6_9FIRM
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:ERI91640.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit
L3_132_000M1_scaffold_237_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7296..8435)
DNA (1140bp) protein (380aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
glgC2; glucose-1-phosphate adenylyltransferase GlgC (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CM86_9FIRM
L3_132_000M1_scaffold_237_6
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(8492..10453)
DNA (1962bp) protein (654aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
1,4-alpha-glucan branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V7E9_9FUSO
L3_132_000M1_scaffold_237_7
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10508..10963)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00929.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
L3_132_000M1_scaffold_237_8
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(10986..11867)
DNA (882bp) protein (294aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
RluA family pseudouridine synthase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HF15_9FUSO
pseudouridine synthase, RluA family
L3_132_000M1_scaffold_237_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11900..12820)
DNA (921bp) protein (307aa)
glutaminase (EC:3.5.1.2)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Glutaminase 2 n=10 Tax=Clostridium perfringens RepID=GLSA2_CLOPE
L3_132_000M1_scaffold_237_10
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(13122..14285)
DNA (1164bp) protein (388aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Fusobacterium ulcerans 12-1B RepID=S2LGK2_9FUSO
N-acetylglucosamine-6-phosphate deacetylase
L3_132_000M1_scaffold_237_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14495..15832)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S668_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42157.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
MATE efflux family protein
L3_132_000M1_scaffold_237_12
Fusobacterium gonidiaformans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

16398..16700
DNA (303bp) protein (101aa)
Putative integration host factor subunit alpha n=1 Tax=Fusobacterium gonidiaformans 3-1-5R RepID=E5BEP9_9FUSO
Putative integration host factor subunit alpha {ECO:0000313|EMBL:EFS20580.1}; TaxID=469605 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium gonidiaformans 3-1-5R.;"
histone family protein DNA-binding protein
L3_132_000M1_scaffold_237_13
unknown

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16826..17110
DNA (285bp) protein (95aa)

This feature has no annotations

L3_132_000M1_scaffold_237_14
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

17187..18569
DNA (1383bp) protein (461aa)
MATE efflux family protein n=2 Tax=Fusobacterium ulcerans RepID=H1PST6_9FUSO
MATE efflux family protein {ECO:0000313|EMBL:EFS26542.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
MATE efflux family protein
L3_132_000M1_scaffold_237_15
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(18784..19677)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VDG5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERT69742.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
transcription factor, CoiA-like family
L3_132_000M1_scaffold_237_16
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(20005..21396)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VAI4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERT68560.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
hypothetical protein
L3_132_000M1_scaffold_237_17
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21561..22724
DNA (1164bp) protein (388aa)
Anaerobic sulfatase maturase {ECO:0000313|EMBL:EEO34580.1}; EC=1.1.99.- {ECO:0000313|EMBL:EEO34580.1};; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
Anaerobic sulfatase maturase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9P3_FUSMR
radical SAM protein
L3_132_000M1_scaffold_237_18
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(22997..24103)
DNA (1107bp) protein (369aa)
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
Alanine dehydrogenase n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HB44_ILYPC
L3_132_000M1_scaffold_237_19
unknown

Not on your lists

24422..24787
DNA (366bp) protein (122aa)

This feature has no annotations

L3_132_000M1_scaffold_237_20
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

24852..29099
DNA (4248bp) protein (1416aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JIF7_FUSVA
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EES65074.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
activator of (R)-2-hydroxyglutaryl-coA dehydratase
L3_132_000M1_scaffold_237_21
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

29395..30072
DNA (678bp) protein (226aa)
FCD domain protein n=2 Tax=Fusobacterium necrophorum subsp. funduliforme RepID=I3DC94_9FUSO
FCD domain protein {ECO:0000313|EMBL:EJU17569.1}; TaxID=1161424 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. funduliforme Fnf 1007.;"
Transcriptional regulators
L3_132_000M1_scaffold_237_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30510..32051
DNA (1542bp) protein (514aa)
L-lactate permease n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VN85_9FIRM
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:CDA31809.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_132_000M1_scaffold_237_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32121..33548
DNA (1428bp) protein (476aa)
FAD/FMN-containing dehydrogenases (EC:1.1.3.15)
Putative glycolate oxidase, subunit GlcD n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QUS7_9FIRM
Putative glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:ERK42477.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_132_000M1_scaffold_237_24
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33654..34790
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenases (EC:1.3.8.1)
Putative butyryl-CoA dehydrogenase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QMF5_9FIRM
Putative butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERK42478.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_132_000M1_scaffold_237_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34811..35587
DNA (777bp) protein (259aa)
Electron transfer flavoprotein n=2 Tax=Clostridiales RepID=U2PFH0_9FIRM
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:CCZ63702.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Electron transfer flavoprotein, beta subunit
L3_132_000M1_scaffold_237_26
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35600..36586
DNA (987bp) protein (329aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NWP8_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:ERK42480.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_132_000M1_scaffold_237_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36703..38142)
DNA (1440bp) protein (480aa)
6-phospho-beta-glucosidase BglA n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQV7_9FIRM
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:CCZ68163.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
aryl-phospho-beta-D-glucosidase
L3_132_000M1_scaffold_237_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38198..39583)
DNA (1386bp) protein (462aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EDQ97620.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDQ97620.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
PTS system, beta-glucoside-specific, IIABC component n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7C2_9FIRM
PTS beta-glucoside transporter subunit IIABC
L3_132_000M1_scaffold_237_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39789..40667)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68161.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, RpiR family
L3_132_000M1_scaffold_237_30
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(40742..41887)
DNA (1146bp) protein (382aa)
Putative aspartate transaminase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JL57_FUSVA
Putative aspartate transaminase {ECO:0000313|EMBL:EES64175.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
aspartate aminotransferase
Displaying items 1-30 of 35 in total

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