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L3_132_000M1_scaffold_1243

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_1243_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..298
DNA (297bp) protein (99aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0X4_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDE20423.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_1243_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(364..2661)
DNA (2298bp) protein (766aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK25_9FIRM
L3_132_000M1_scaffold_1243_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2857..3495)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20419.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterised ACR, YkgG family COG1556.
L3_132_000M1_scaffold_1243_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3604..4743)
DNA (1140bp) protein (380aa)
Purine catabolism regulatory protein-like family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G334_9FIRM
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:CDE20417.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
PucR family transcriptional regulator
L3_132_000M1_scaffold_1243_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5099..6055
DNA (957bp) protein (319aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L-lactate dehydrogenase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZT1_9FIRM
L-lactate dehydrogenase
L3_132_000M1_scaffold_1243_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6231..7253
DNA (1023bp) protein (341aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK05_9FIRM
L3_132_000M1_scaffold_1243_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7778..8296)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BK04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61969.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
flavodoxin family protein
L3_132_000M1_scaffold_1243_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8371..9066)
DNA (696bp) protein (232aa)
Chaperone protein DnaJ n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0W1_9FIRM
Chaperone protein DnaJ {ECO:0000313|EMBL:CDE20408.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_132_000M1_scaffold_1243_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9063..10007)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20406.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_1243_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10017..10418)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FZS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20405.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_1243_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10608..11897
DNA (1290bp) protein (430aa)
UPF0597 protein BN651_00340 n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0F4_9FIRM
UPF0597 protein BN651_00340 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_1243_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11935..12771
DNA (837bp) protein (279aa)
Sortase SrtB family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZS0_9FIRM
Sortase SrtB family {ECO:0000313|EMBL:CDE20400.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
sortase, SrtB family
L3_132_000M1_scaffold_1243_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12771..12965
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20398.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_1243_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13095..13382
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=2 Tax=Dorea RepID=A6BJZ7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
SSU ribosomal protein S6P
L3_132_000M1_scaffold_1243_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13403..13867
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=2 Tax=Dorea RepID=A6BJZ6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
single-strand binding protein
L3_132_000M1_scaffold_1243_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13927..14193
DNA (267bp) protein (89aa)
30S ribosomal protein S18 n=2 Tax=Dorea RepID=A6BJZ5_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
SSU ribosomal protein S18P
L3_132_000M1_scaffold_1243_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14372..14986
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61959.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_1243_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15012..15743
DNA (732bp) protein (244aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZB8_9FIRM
glucosamine-6-phosphate deaminase
L3_132_000M1_scaffold_1243_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15853..16065)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XFN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19878.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Displaying 19 items

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