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L3_132_000M1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_94_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103..1263
DNA (1161bp) protein (387aa)
glycoside hydrolase, family 1 (EC:3.2.1.21)
Pneumococcal surface protein A n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RHT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76694.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_132_000M1_scaffold_94_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1339..3180)
DNA (1842bp) protein (614aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38990.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
N-acetylmuramoyl-L-alanine amidase
L3_132_000M1_scaffold_94_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3198..4748)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80514.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
pspA; pneumococcal surface protein PspA
L3_132_000M1_scaffold_94_4
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(4866..6701)
DNA (1836bp) protein (612aa)
Putative phosphoglycerol transferase I n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XDK9_9FIRM
Putative phosphoglycerol transferase I {ECO:0000313|EMBL:CDA13668.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_132_000M1_scaffold_94_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6819..7232)
DNA (414bp) protein (138aa)
GtrA-like protein n=2 Tax=Dorea RepID=A6BHG5_9FIRM
GtrA-like protein {ECO:0000313|EMBL:EDM62925.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
gtrA; GtrA containing transmembrane protein
L3_132_000M1_scaffold_94_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7393..7659)
DNA (267bp) protein (89aa)
Phosphocarrier, HPr family n=2 Tax=Dorea RepID=A6BHG6_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EDM62926.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
phosphocarrier HPr family protein
L3_132_000M1_scaffold_94_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7685..9013)
DNA (1329bp) protein (443aa)
YbbR-like protein n=2 Tax=Dorea RepID=A6BHG7_9FIRM
YbbR-like protein {ECO:0000313|EMBL:CDE21396.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_94_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8994..9872)
DNA (879bp) protein (293aa)
TIGR00159 family protein n=2 Tax=Dorea RepID=A6BHG8_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:CDE21397.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
conserved hypothetical protein TIGR00159
L3_132_000M1_scaffold_94_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9918..11150)
DNA (1233bp) protein (411aa)
Cation diffusion facilitator family transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHG9_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EDM62929.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_94_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11151..11546)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62930.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_94_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11605..12342)
DNA (738bp) protein (246aa)
ComF family protein n=2 Tax=Dorea RepID=A6BHH1_9FIRM
ComF family protein {ECO:0000313|EMBL:EDM62931.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted amidophosphoribosyltransferases
L3_132_000M1_scaffold_94_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12326..14539)
DNA (2214bp) protein (738aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Helicase RecD/TraA family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G5U1_9FIRM
helicase, RecD/TraA family protein
L3_132_000M1_scaffold_94_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14572..15561)
DNA (990bp) protein (330aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHH3_9FIRM
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EDM62933.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
rod shape-determining protein MreB
L3_132_000M1_scaffold_94_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15768..18611)
DNA (2844bp) protein (948aa)
UvrABC system protein A n=1 Tax=Dorea longicatena CAG:42 RepID=R7G395_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
excinuclease ABC, A subunit
L3_132_000M1_scaffold_94_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18634..20622)
DNA (1989bp) protein (663aa)
UvrABC system protein B n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHH5_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
excinuclease ABC, B subunit
L3_132_000M1_scaffold_94_16
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

20859..21272
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XKQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15465.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Ion channel.
L3_132_000M1_scaffold_94_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21342..22589)
DNA (1248bp) protein (416aa)
Voltage-gated chloride channel family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEJ2_9FIRM
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:CDD76350.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Chloride channel protein EriC
L3_132_000M1_scaffold_94_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22613..23389)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3F1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25763.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_132_000M1_scaffold_94_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23584..25962)
DNA (2379bp) protein (793aa)
Pyruvate-formate lyase (EC:2.3.1.54)
Putative formate C-acetyltransferase n=2 Tax=Dorea RepID=A6BHN6_9FIRM
Putative formate C-acetyltransferase {ECO:0000313|EMBL:EDM62787.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_94_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25967..26875)
DNA (909bp) protein (303aa)
Glycyl-radical enzyme activating protein family protein {ECO:0000313|EMBL:EDM62788.1}; EC=1.97.1.- {ECO:0000313|EMBL:EDM62788.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Glycyl-radical enzyme activating protein family protein n=2 Tax=Dorea RepID=A6BHN7_9FIRM
glycyl-radical enzyme activating family protein
L3_132_000M1_scaffold_94_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27034..27639)
DNA (606bp) protein (202aa)
Probable GTP-binding protein EngB n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHN9_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L3_132_000M1_scaffold_94_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27686..30016)
DNA (2331bp) protein (777aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Dorea longicatena CAG:42 RepID=R7FT07_9FIRM
L3_132_000M1_scaffold_94_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30109..31368)
DNA (1260bp) protein (420aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Dorea RepID=A6BHP1_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_132_000M1_scaffold_94_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31395..31976)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHP2_9FIRM
L3_132_000M1_scaffold_94_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32018..33304)
DNA (1287bp) protein (429aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Trigger factor n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHP3_9FIRM
trigger factor
L3_132_000M1_scaffold_94_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33486..34031)
DNA (546bp) protein (182aa)
DJ-1 family protein n=2 Tax=Dorea RepID=A6BHP4_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:EDM62795.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DJ-1 family protein
L3_132_000M1_scaffold_94_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34140..34583
DNA (444bp) protein (148aa)
Adenylate cyclase n=2 Tax=Dorea RepID=A6BHP5_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:EDM62796.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
adenylate cyclase
L3_132_000M1_scaffold_94_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34711..35118
DNA (408bp) protein (136aa)
DNA-binding helix-turn-helix protein n=2 Tax=Dorea RepID=A6BHP6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE16863.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Helix-turn-helix.
L3_132_000M1_scaffold_94_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35147..36355)
DNA (1209bp) protein (403aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Aspartokinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FNJ3_9FIRM
aspartate kinase
L3_132_000M1_scaffold_94_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36383..37606)
DNA (1224bp) protein (408aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPU1_9FIRM
Displaying items 1-30 of 53 in total

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