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L3_132_000M1_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_143_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116..544)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63561.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_143_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(692..1285)
DNA (594bp) protein (198aa)
Tat pathway signal sequence domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G055_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDE20550.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_143_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1275..1757)
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG02_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EDM63558.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative RNA polymerase ECF subfamily sigma factor
L3_132_000M1_scaffold_143_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1974..2501
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17889.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_143_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2519..3142
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BFZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17892.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_143_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3246..4970
DNA (1725bp) protein (575aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFZ4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM63550.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type multidrug transport system, ATPase and permease components
L3_132_000M1_scaffold_143_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5206..5577
DNA (372bp) protein (124aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=2 Tax=Dorea RepID=A6BFZ3_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CDE17894.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_143_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5587..6192
DNA (606bp) protein (202aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EDM63549.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EDM63549.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=2 Tax=Dorea RepID=A6BFZ3_9FIRM
L3_132_000M1_scaffold_143_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6288..7634)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63548.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_143_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7621..8388)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17896.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_143_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8736..9854
DNA (1119bp) protein (373aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EDM63546.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EDM63546.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFZ0_9FIRM
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
L3_132_000M1_scaffold_143_12
unknown

Not on your lists

9887..10087
DNA (201bp) protein (67aa)

This feature has no annotations

L3_132_000M1_scaffold_143_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10216..10413
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Dorea RepID=A6BFY7_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDE17901.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
sulfur carrier protein ThiS
L3_132_000M1_scaffold_143_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10419..11102
DNA (684bp) protein (228aa)
thiamine biosynthesis protein ThiF, family 2 (EC:2.7.7.-)
Thiamine biosynthesis protein ThiF n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFY6_9FIRM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EDM63542.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_143_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11197..11985
DNA (789bp) protein (263aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Thiazole synthase n=2 Tax=Dorea RepID=A6BFY5_9FIRM
thiazole-phosphate synthase
L3_132_000M1_scaffold_143_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11998..13224
DNA (1227bp) protein (409aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFY4_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDM63540.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
tyrosine lyase ThiH
L3_132_000M1_scaffold_143_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13278..13865
DNA (588bp) protein (196aa)
Thiamine monophosphate synthase (EC:2.5.1.3)
Thiamine monophosphate synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FW38_9FIRM
Thiamine monophosphate synthase {ECO:0000313|EMBL:CDE17927.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_143_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14052..14486
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=2 Tax=Dorea RepID=A6BFY2_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDE17928.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator, MarR family
L3_132_000M1_scaffold_143_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14487..15263
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17930.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted permeases
L3_132_000M1_scaffold_143_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15395..15985)
DNA (591bp) protein (197aa)
HD domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFX9_9FIRM
HD domain protein {ECO:0000313|EMBL:EDM63535.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted hydrolases of HD superfamily
L3_132_000M1_scaffold_143_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16165..16788
DNA (624bp) protein (208aa)
GDSL-like protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRL4_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CDE17969.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Lysophospholipase L1 and related esterases
L3_132_000M1_scaffold_143_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16883..17785)
DNA (903bp) protein (301aa)
Putative membrane protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFX7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDM63533.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_132_000M1_scaffold_143_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17941..19689
DNA (1749bp) protein (583aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EDM63529.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDM63529.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Peptidase, S8/S53 family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFX3_9FIRM
peptidase S8 and S53 subtilisin kexin sedolisin
L3_132_000M1_scaffold_143_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19819..20802
DNA (984bp) protein (328aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFX2_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDM63528.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
aldo/keto reductase
L3_132_000M1_scaffold_143_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20804..21184
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63527.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_143_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21209..22228
DNA (1020bp) protein (340aa)
Dehydrogenase FMN-dependent n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVJ1_9FIRM
Dehydrogenase FMN-dependent {ECO:0000313|EMBL:CDE18676.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L3_132_000M1_scaffold_143_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22229..23275)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62077.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted membrane protein
L3_132_000M1_scaffold_143_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23428..24327
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTX9_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDE17187.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Putative transcriptional regulator (LysR family)
L3_132_000M1_scaffold_143_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24384..25034
DNA (651bp) protein (217aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=2 Tax=Dorea RepID=A6BJJ6_9FIRM
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CDE17188.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
O-6-methylguanine DNA methyltransferase
L3_132_000M1_scaffold_143_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25192..26328
DNA (1137bp) protein (379aa)
YibE/F-like protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTZ7_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:CDE17207.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted multitransmembrane protein
Displaying items 1-30 of 60 in total

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