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L3_132_000M1_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_188_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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543..2300
DNA (1758bp) protein (586aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Radical SAM domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYX2_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDE19851.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_188_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2466..2567
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19846.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_188_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2592..3608
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FX61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19844.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Hydrogenase maturation factor
L3_132_000M1_scaffold_188_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3562..4053
DNA (492bp) protein (164aa)
Transcriptional regulator, AsnC family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF48_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDM63635.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Lrp; transcriptional regulator
L3_132_000M1_scaffold_188_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4050..5222
DNA (1173bp) protein (391aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDM63634.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDM63634.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Aminotransferase, class I/II n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF47_9FIRM
Aspartate/tyrosine/aromatic aminotransferase
L3_132_000M1_scaffold_188_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5473..5865
DNA (393bp) protein (131aa)
Transcriptional regulator MerR family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FX08_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDE19420.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
MerR family transcriptional regulator
L3_132_000M1_scaffold_188_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5856..7610
DNA (1755bp) protein (585aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF45_9FIRM
L3_132_000M1_scaffold_188_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7891..8832
DNA (942bp) protein (314aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0E9_9FIRM
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CDE19442.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_188_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8875..9948)
DNA (1074bp) protein (358aa)
AraC family transcriptional regulator n=1 Tax=Dorea longicatena CAG:42 RepID=R7FY54_9FIRM
AraC family transcriptional regulator {ECO:0000313|EMBL:CDE19443.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator AraC family
L3_132_000M1_scaffold_188_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10186..11538
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19444.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_132_000M1_scaffold_188_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11584..12843
DNA (1260bp) protein (420aa)
Disaccharride transporter major facilitator super family (MFS) n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWL5_9CLOT
Disaccharride transporter major facilitator super family (MFS) {ECO:0000313|EMBL:CDC22866.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sugar transport protein
L3_132_000M1_scaffold_188_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12859..14442
DNA (1584bp) protein (528aa)
ramA; alpha-L-rhamnosidase (EC:3.2.1.40)
Bacterial alpha-L-rhamnosidase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVZ9_9FIRM
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CDE19464.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_188_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14752..15675
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FXQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19466.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_188_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15696..16187
DNA (492bp) protein (164aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Dorea RepID=A6BF40_9FIRM
L3_132_000M1_scaffold_188_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16491..16799
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BF39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19470.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_188_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16851..18866
DNA (2016bp) protein (672aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Putative V-type sodium ATPase, I subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF38_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_188_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18869..19354
DNA (486bp) protein (162aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=2 Tax=Dorea RepID=A6BF37_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:EDM63624.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_188_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19372..19968
DNA (597bp) protein (199aa)
Putative ATP synthase, subunit E n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF36_9FIRM
Putative ATP synthase, subunit E {ECO:0000313|EMBL:EDM63623.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_188_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19983..20951
DNA (969bp) protein (323aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Putative ATP synthase, subunit C n=2 Tax=Dorea RepID=A6BF35_9FIRM
Putative ATP synthase subunit C {ECO:0000313|EMBL:CDE19474.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_188_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20944..21261
DNA (318bp) protein (106aa)
ATP synthase, subunit F n=2 Tax=Dorea RepID=A6BF34_9FIRM
ATP synthase subunit F {ECO:0000313|EMBL:CDE19476.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_188_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21281..23047
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Dorea longicatena CAG:42 RepID=R7FY87_9FIRM
L3_132_000M1_scaffold_188_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23051..24421
DNA (1371bp) protein (457aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF32_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_188_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24491..25150
DNA (660bp) protein (220aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Dorea longicatena CAG:42 RepID=R7FX90_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_188_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25348..25674
DNA (327bp) protein (109aa)
Transcriptional regulator PadR family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0K1_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CDE19502.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
PadR-like family transcriptional regulator
L3_132_000M1_scaffold_188_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25678..26316
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19503.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_188_26
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26356..28233
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67957.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_132_000M1_scaffold_188_27
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28224..28949
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67958.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
ABC transporter ATP-binding protein
L3_132_000M1_scaffold_188_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29348..29704
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G3J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR47738.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_132_000M1_scaffold_188_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29846..30100
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32348.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L3_132_000M1_scaffold_188_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30274..30663
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BF27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18574.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Displaying items 1-30 of 53 in total

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