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L3_132_000M1_scaffold_240

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_240_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(90..1193)
DNA (1104bp) protein (368aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Dorea RepID=A6BEK7_9FIRM
L3_132_000M1_scaffold_240_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1407..2978
DNA (1572bp) protein (524aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEK6_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDM64045.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L3_132_000M1_scaffold_240_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2996..4129
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Dorea RepID=A6BEK5_9FIRM
L3_132_000M1_scaffold_240_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4220..4528
DNA (309bp) protein (103aa)
Preprotein translocase YajC subunit n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWC7_9FIRM
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDE18027.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
preprotein translocase, YajC subunit
L3_132_000M1_scaffold_240_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4803..7055
DNA (2253bp) protein (751aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDM64042.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDM64042.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEK3_9FIRM
L3_132_000M1_scaffold_240_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7236..7976
DNA (741bp) protein (247aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Dorea RepID=R7FWD6_9FIRM
pyruvate formate-lyase activating enzyme
L3_132_000M1_scaffold_240_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8183..9268
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ9_9FIRM
L3_132_000M1_scaffold_240_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9326..10999
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTR2_9FIRM
L3_132_000M1_scaffold_240_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10977..12710
DNA (1734bp) protein (578aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ7_9FIRM
L3_132_000M1_scaffold_240_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12747..13829
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ6_9FIRM
L3_132_000M1_scaffold_240_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13832..14995
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDM64034.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDM64034.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=2 Tax=Dorea RepID=A6BEJ5_9FIRM
L3_132_000M1_scaffold_240_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15133..16581
DNA (1449bp) protein (483aa)
Polysaccharide deacetylase n=2 Tax=Dorea RepID=A6BEJ4_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EDM64033.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted xylanase/chitin deacetylase
L3_132_000M1_scaffold_240_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16644..17819)
DNA (1176bp) protein (392aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Dorea RepID=A6BEJ3_9FIRM
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:CDE18046.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_240_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17980..19308
DNA (1329bp) protein (443aa)
GTPase Der n=2 Tax=Dorea RepID=A6BEJ2_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ribosome-associated GTPase EngA
L3_132_000M1_scaffold_240_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19311..19964
DNA (654bp) protein (218aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ1_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_132_000M1_scaffold_240_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19998..21008
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Dorea RepID=A6BEJ0_9FIRM
L3_132_000M1_scaffold_240_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21089..21976)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=2 Tax=Dorea RepID=A6BEI9_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDE18050.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LysR family transcriptional regulator
L3_132_000M1_scaffold_240_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22192..23028
DNA (837bp) protein (279aa)
AP endonuclease, family 2 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEI8_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EDM64027.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_240_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23072..25042
DNA (1971bp) protein (657aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEI7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDM64026.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_132_000M1_scaffold_240_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25136..26011
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=2 Tax=Dorea RepID=A6BEI6_9FIRM
L3_132_000M1_scaffold_240_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26033..27319
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEI5_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM64024.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_240_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27611..29044
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18063.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_240_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29113..29874)
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEI3_9FIRM
L3_132_000M1_scaffold_240_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29888..30775)
DNA (888bp) protein (296aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Shikimate dehydrogenase n=2 Tax=Dorea RepID=A6BEI2_9FIRM
hypothetical protein
L3_132_000M1_scaffold_240_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30877..32433
DNA (1557bp) protein (519aa)
Stage IV sporulation protein A n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTT6_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CDE18066.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
stage IV sporulation protein A
L3_132_000M1_scaffold_240_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32585..33733
DNA (1149bp) protein (383aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWG6_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDE18067.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
iron-containing alcohol dehydrogenase
L3_132_000M1_scaffold_240_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33959..34429
DNA (471bp) protein (157aa)
Molybdenum cofactor synthesis domain protein n=2 Tax=Dorea RepID=A6BEH9_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:CDE18068.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
molybdopterin adenylyltransferase
L3_132_000M1_scaffold_240_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34435..35136
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64017.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_132_000M1_scaffold_240_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35614..36060)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18070.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_132_000M1_scaffold_240_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36074..36991)
DNA (918bp) protein (306aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Dorea RepID=A6BEH3_9FIRM
Displaying items 1-30 of 41 in total

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