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L3_132_000M1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_406_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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116..1348
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KVY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33715.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
TRAP transporter subunit DctM
L3_132_000M1_scaffold_406_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1367..2131
DNA (765bp) protein (255aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.125)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Clostridium sp. CAG:299 RepID=R7AN59_9CLOT
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDD43997.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_132_000M1_scaffold_406_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2209..3162
DNA (954bp) protein (318aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z6U8_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:CDD43998.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_132_000M1_scaffold_406_4
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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3175..4152
DNA (978bp) protein (326aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=2 Tax=Anaerostipes RepID=E5VVD3_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CDC38000.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L3_132_000M1_scaffold_406_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4181..5122
DNA (942bp) protein (314aa)
2-keto-3-deoxygluconate kinase (EC:2.7.1.45)
PfkB family carbohydrate kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZD07_9CLOT
PfkB family carbohydrate kinase {ECO:0000313|EMBL:CDD44000.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_132_000M1_scaffold_406_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5534..6793
DNA (1260bp) protein (420aa)
Putative permease n=2 Tax=Dorea RepID=A6BCN9_9FIRM
Putative permease {ECO:0000313|EMBL:EDM64206.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
uracil-xanthine permease
L3_132_000M1_scaffold_406_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6946..7737)
DNA (792bp) protein (264aa)
Cof-like hydrolase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4X9_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CDE21763.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
HAD-superfamily hydrolase, subfamily IIB
L3_132_000M1_scaffold_406_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7816..8295
DNA (480bp) protein (160aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDM64216.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EDM64216.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=2 Tax=Dorea RepID=A6BCP9_9FIRM
L3_132_000M1_scaffold_406_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8521..9213
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=2 Tax=Dorea RepID=A6BCQ7_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDM64224.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator, GntR family
L3_132_000M1_scaffold_406_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9356..10138
DNA (783bp) protein (261aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDM64225.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDM64225.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Dorea RepID=A6BCQ8_9FIRM
L3_132_000M1_scaffold_406_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10244..10501
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE16791.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_406_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10709..11410
DNA (702bp) protein (234aa)
RNA polymerase sigma factor RpoD domain protein n=2 Tax=Dorea RepID=A6BCR0_9FIRM
RNA polymerase sigma factor RpoD domain protein {ECO:0000313|EMBL:CDE16792.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_406_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11425..12708)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64228.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Hemolysins and related proteins containing CBS domains
L3_132_000M1_scaffold_406_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12915..13826
DNA (912bp) protein (304aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCR2_9FIRM
L3_132_000M1_scaffold_406_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13828..14709
DNA (882bp) protein (294aa)
UPF0042 nucleotide-binding protein BN651_01119 n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPN5_9FIRM
Nucleotide-binding protein BN651_01119 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted P-loop-containing kinase
L3_132_000M1_scaffold_406_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14718..15623
DNA (906bp) protein (302aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQB9_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_406_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15616..15867
DNA (252bp) protein (84aa)
Phosphocarrier, HPr family n=2 Tax=Dorea RepID=A6BCR5_9FIRM
Phosphocarrier HPr family {ECO:0000313|EMBL:CDE16797.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Phosphotransferase System HPr (HPr) Family
L3_132_000M1_scaffold_406_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15988..16899
DNA (912bp) protein (304aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EDM64233.1}; EC=2.7.1.- {ECO:0000313|EMBL:EDM64233.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCR6_9FIRM
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_132_000M1_scaffold_406_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17384..18250
DNA (867bp) protein (289aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Dorea longicatena CAG:42 RepID=R7FNE6_9FIRM
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDE16804.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_406_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18447..20558
DNA (2112bp) protein (704aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDM64241.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDM64241.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCS4_9FIRM
L3_132_000M1_scaffold_406_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20718..21197
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64242.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted membrane protein
L3_132_000M1_scaffold_406_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21427..21648
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20342.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_406_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21872..23044
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64244.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted N6-adenine-specific DNA methylase
L3_132_000M1_scaffold_406_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23046..23657
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=Dorea RepID=A6BCS8_9FIRM
L3_132_000M1_scaffold_406_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23714..24199
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Phosphodiesterase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCS9_9FIRM
phosphoesterase, MJ0936 family
L3_132_000M1_scaffold_406_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25187..27136
DNA (1950bp) protein (650aa)
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1T8_9FIRM
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases {ECO:0000313|EMBL:CDC17410.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_132_000M1_scaffold_406_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27186..28115)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17358.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_406_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28337..29119
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FUF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17357.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
L3_132_000M1_scaffold_406_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29347..30465)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17355.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_406_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30703..31374
DNA (672bp) protein (224aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=2 Tax=Dorea RepID=A6BCT4_9FIRM
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CDE17354.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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