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L3_132_000M1_scaffold_458

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_458_1
unknown

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75..584
DNA (510bp) protein (170aa)

This feature has no annotations

L3_132_000M1_scaffold_458_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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674..1612
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BII9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62530.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_458_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1745..2698
DNA (954bp) protein (318aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIJ0_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDM62531.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_132_000M1_scaffold_458_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2732..3910
DNA (1179bp) protein (393aa)
Putative hydroxymethylpyrimidine transporter CytX n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUU6_9FIRM
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CDE18253.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
probable hydroxymethylpyrimidine transporter CytX
L3_132_000M1_scaffold_458_5
unknown

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3925..4053
DNA (129bp) protein (43aa)

This feature has no annotations

L3_132_000M1_scaffold_458_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4112..6112
DNA (2001bp) protein (667aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4C0_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE20857.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
NADH:flavin oxidoreductase
L3_132_000M1_scaffold_458_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6290..7909
DNA (1620bp) protein (540aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIJ3_9FIRM
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:EDM62534.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Phosphotransferase enzyme family.
L3_132_000M1_scaffold_458_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8053..8529
DNA (477bp) protein (159aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Dorea RepID=A6BIJ4_9FIRM
L3_132_000M1_scaffold_458_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8743..10266
DNA (1524bp) protein (508aa)
Transporter SSS family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUV0_9FIRM
Transporter SSS family {ECO:0000313|EMBL:CDE18258.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Na+/solute symporter
L3_132_000M1_scaffold_458_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10462..12450
DNA (1989bp) protein (663aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUG4_9FIRM
L3_132_000M1_scaffold_458_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12636..13049
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18263.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_458_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13100..14464)
DNA (1365bp) protein (455aa)
Transporter, major facilitator family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIJ8_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM62539.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
di-/tripeptide transporter
L3_132_000M1_scaffold_458_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14856..15467
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FX32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18267.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_458_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15706..17145
DNA (1440bp) protein (480aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Carboxyl transferase domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIK1_9FIRM
Carboxyl transferase domain protein {ECO:0000313|EMBL:EDM62542.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_458_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17202..17945
DNA (744bp) protein (248aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTY2_9FIRM
sodium pump decarboxylases, gamma subunit
L3_132_000M1_scaffold_458_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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17958..18341
DNA (384bp) protein (128aa)
Biotin-requiring enzyme n=2 Tax=Dorea RepID=A6BIK3_9FIRM
Biotin-requiring enzyme {ECO:0000313|EMBL:EDM62544.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Biotin carboxyl carrier protein
L3_132_000M1_scaffold_458_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18386..19540
DNA (1155bp) protein (385aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=2 Tax=Dorea RepID=A6BIK4_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDE18277.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_458_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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19567..20982
DNA (1416bp) protein (472aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Conserved carboxylase domain protein n=2 Tax=Dorea RepID=A6BIK5_9FIRM
Conserved carboxylase domain protein {ECO:0000313|EMBL:EDM62546.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_132_000M1_scaffold_458_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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21710..22648
DNA (939bp) protein (313aa)
SIS domain protein n=2 Tax=Dorea RepID=A6BIK8_9FIRM
SIS domain protein {ECO:0000313|EMBL:EDM62549.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Transcriptional regulators
L3_132_000M1_scaffold_458_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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22645..23886
DNA (1242bp) protein (414aa)
Flavoprotein family protein n=2 Tax=Dorea RepID=A6BIK9_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CDE21556.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
conserved hypothetical protein TIGR00275
L3_132_000M1_scaffold_458_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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23917..24573
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G699_9FIRM
L3_132_000M1_scaffold_458_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24605..25462
DNA (858bp) protein (286aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G485_9FIRM
L3_132_000M1_scaffold_458_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25467..26528
DNA (1062bp) protein (354aa)
Putative ribosomal protein S1 n=2 Tax=Dorea RepID=A6BIL2_9FIRM
Putative ribosomal protein S1 {ECO:0000313|EMBL:CDE21567.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Ribosomal protein S1
L3_132_000M1_scaffold_458_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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26797..28119
DNA (1323bp) protein (441aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIL3_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
electron transport complex, RnfABCDGE type, C subunit
L3_132_000M1_scaffold_458_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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28169..29098
DNA (930bp) protein (310aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIL4_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
NqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit 2
L3_132_000M1_scaffold_458_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29098..29679
DNA (582bp) protein (194aa)
Electron transport complex RnfABCDGE type G subunit n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3R3_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
electron transport complex, RnfABCDGE type, G subunit
L3_132_000M1_scaffold_458_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29697..30416
DNA (720bp) protein (240aa)
Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Dorea RepID=A6BIL6_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
electron transport complex, RnfABCDGE type, E subunit
L3_132_000M1_scaffold_458_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30431..31006
DNA (576bp) protein (192aa)
Electron transport complex RnfABCDGE type A subunit n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4C7_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
electron transport complex, RnfABCDGE type, A subunit
L3_132_000M1_scaffold_458_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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31020..31811
DNA (792bp) protein (264aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIL8_9FIRM
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EDM62559.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
electron transport complex, RnfABCDGE type, B subunit
L3_132_000M1_scaffold_458_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31816..32274
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62560.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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