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L3_132_000M1_scaffold_583

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_583_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..597)
DNA (597bp) protein (199aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
Isoaspartyl dipeptidase n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2K5_9FIRM
L3_132_000M1_scaffold_583_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(627..1172)
DNA (546bp) protein (182aa)
Short-chain fatty acids transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFQ0_9FIRM
Short-chain fatty acids transporter {ECO:0000313|EMBL:CDD76886.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L3_132_000M1_scaffold_583_3
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1279..1758)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6SIS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC57449.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
Acetyltransferases
L3_132_000M1_scaffold_583_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1821..2183)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WV27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70893.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
HD domain.
L3_132_000M1_scaffold_583_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2195..2887)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WV26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70892.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_132_000M1_scaffold_583_6
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2986..3615
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SG70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC56549.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_132_000M1_scaffold_583_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3682..5757)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17259.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted exporters of the RND superfamily
L3_132_000M1_scaffold_583_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5916..8144)
DNA (2229bp) protein (743aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
UvrD/REP helicase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR14_9FIRM
hypothetical protein
L3_132_000M1_scaffold_583_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8123..9502)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRN7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE17261.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_583_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9502..10986)
DNA (1485bp) protein (495aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
ATPase AAA family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU80_9FIRM
ATPase AAA family {ECO:0000313|EMBL:CDE17262.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_583_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11118..12083)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17263.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
radical SAM protein
L3_132_000M1_scaffold_583_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12083..12511)
DNA (429bp) protein (143aa)
Oxidoreductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPR5_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CDE17264.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
C_GCAxxG_C_C family protein
L3_132_000M1_scaffold_583_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12534..13553)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17266.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
aminoglycoside phosphotransferase
L3_132_000M1_scaffold_583_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13592..14923)
DNA (1332bp) protein (444aa)
Glycosyltransferase group 2 family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRZ8_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDE17268.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_583_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14940..15914)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17270.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
iron-sulfur binding reductase
L3_132_000M1_scaffold_583_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15904..16584)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17273.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_583_17
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16574..16999)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6S389_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC55643.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_132_000M1_scaffold_583_18
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17104..18213)
DNA (1110bp) protein (370aa)
Sulfurtransferase n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SDJ3_9FIRM
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
rhodanese domain-containing protein
L3_132_000M1_scaffold_583_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18283..19152)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17278.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Rhodanese-related sulfurtransferase
L3_132_000M1_scaffold_583_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19196..19528)
DNA (333bp) protein (111aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS10_9FIRM
alkylhydroperoxidase-like protein
L3_132_000M1_scaffold_583_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19542..20246)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17285.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_583_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20376..23129)
DNA (2754bp) protein (918aa)
Putative translation elongation factor G n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRQ6_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:CDE17286.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
small GTP-binding protein domain
L3_132_000M1_scaffold_583_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23338..24201
DNA (864bp) protein (288aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUA1_9FIRM
L3_132_000M1_scaffold_583_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24386..24742)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=2 Tax=Dorea RepID=A6BCY1_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:EDM64298.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
stage V sporulation protein AE
L3_132_000M1_scaffold_583_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24771..25775)
DNA (1005bp) protein (335aa)
Stage V sporulation protein AD n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR34_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDE17290.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Stage V sporulation protein AD (SpoVAD).
L3_132_000M1_scaffold_583_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25810..26271)
DNA (462bp) protein (154aa)
Putative stage V sporulation protein AC n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCX9_9FIRM
Putative stage V sporulation protein AC {ECO:0000313|EMBL:EDM64296.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
stage V sporulation AC, SpoVAC
L3_132_000M1_scaffold_583_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26276..26692)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FUA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17292.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_132_000M1_scaffold_583_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26652..27326)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17293.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Stage V sporulation protein AA.
L3_132_000M1_scaffold_583_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27277..27504)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17294.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_132_000M1_scaffold_583_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27617..28060)
DNA (444bp) protein (148aa)
RNA polymerase sigma factor n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR38_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
RNA polymerase sigma-F factor
Displaying 30 items

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