ggKbase home page

L3_132_000M1_scaffold_1012

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_1012_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(180..1208)
DNA (1029bp) protein (343aa)
asparaginase (EC:3.5.1.1)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30144.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_1012_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1233..2282)
DNA (1050bp) protein (350aa)
L-threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR44_9FIRM
Beta-eliminating lyase {ECO:0000313|EMBL:EEG94906.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_1012_3
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2279..4135)
DNA (1857bp) protein (619aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBR4_9CLOT
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EEG94907.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
cysteine desulfurase family protein
L3_132_000M1_scaffold_1012_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4193..5044)
DNA (852bp) protein (284aa)
Selenium-dependent molybdenum hydroxylase system protein, YqeB family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR46_9FIRM
Selenium-dependent molybdenum hydroxylase system protein, YqeB family {ECO:0000313|EMBL:EEG94908.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L3_132_000M1_scaffold_1012_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5057..5698)
DNA (642bp) protein (214aa)
Selenium metabolism protein YedF n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR47_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:EEG94909.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
selenium metabolism protein YedF
L3_132_000M1_scaffold_1012_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5760..6779)
DNA (1020bp) protein (340aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Selenide, water dikinase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HK77_9FIRM
Selenide, water dikinase
L3_132_000M1_scaffold_1012_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6924..8135
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94911.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_1012_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8362..8574)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94912.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_1012_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8653..11064)
DNA (2412bp) protein (804aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30152.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_1012_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11079..12491)
DNA (1413bp) protein (471aa)
Glycoside/pentoside/hexuronide transporter n=2 Tax=Roseburia RepID=R5HKQ1_9FIRM
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:CCY30153.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sugar transporter
L3_132_000M1_scaffold_1012_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12526..14034)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30154.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_1012_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14058..16493)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HK81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30155.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
beta-galactosidase
L3_132_000M1_scaffold_1012_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16539..17096)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5I074_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30156.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Transcriptional regulator
L3_132_000M1_scaffold_1012_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17154..17291)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94919.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_1012_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17368..18555
DNA (1188bp) protein (396aa)
TIGR00299 family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR58_9FIRM
TIGR00299 family protein {ECO:0000313|EMBL:EEG94920.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_1012_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18615..18824
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23463.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transposase
Displaying 16 items

View Taxonomy