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L3_132_000M1_scaffold_1078

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_1078_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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377..2179
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30142.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative endo-1,4-beta-xylanase
L3_132_000M1_scaffold_1078_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2215..3708
DNA (1494bp) protein (498aa)
Sugar transporter n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKP3_9FIRM
Sugar transporter {ECO:0000313|EMBL:CCY30143.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sugar transporter
L3_132_000M1_scaffold_1078_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3763..5973
DNA (2211bp) protein (737aa)
Beta-glucuronidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3V6_ROSHA
Beta-glucuronidase {ECO:0000313|EMBL:AEN97243.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Beta-glucuronidase
L3_132_000M1_scaffold_1078_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5981..6841
DNA (861bp) protein (287aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZW8_9FIRM
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CCY30297.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
xylose isomerase domain-containing protein
L3_132_000M1_scaffold_1078_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6872..9058
DNA (2187bp) protein (729aa)
Alpha-L-rhamnosidase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0J5_9FIRM
Alpha-L-rhamnosidase {ECO:0000313|EMBL:CCY30296.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
alpha-L-rhamnosidase
L3_132_000M1_scaffold_1078_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9176..10576
DNA (1401bp) protein (467aa)
rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKM3_9FIRM
Rhamnulokinase {ECO:0000313|EMBL:CCY30295.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_1078_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10651..11907
DNA (1257bp) protein (419aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ81_9FIRM
L3_132_000M1_scaffold_1078_8
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11990..12481
DNA (492bp) protein (164aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Rhamnulose-1-phosphate aldolase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R045_9FIRM
Rhamnulose-1-phosphate aldolase
L3_132_000M1_scaffold_1078_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12485..12814
DNA (330bp) protein (110aa)
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZW2_9FIRM
Rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:CCY30292.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_1078_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12983..14182
DNA (1200bp) protein (400aa)
Major Facilitator Superfamily n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5S4_9CLOT
Major Facilitator Superfamily {ECO:0000313|EMBL:CDD73290.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Major Facilitator Superfamily.
L3_132_000M1_scaffold_1078_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14325..15818
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30291.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
RND family efflux transporter, MFP subunit
L3_132_000M1_scaffold_1078_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15815..16519
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ95_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG92001.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC transporter-like protein
L3_132_000M1_scaffold_1078_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16519..17841
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29838.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type antimicrobial peptide transport system, permease component
Displaying 13 items

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