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L3_132_000M1_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_140_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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224..1519
DNA (1296bp) protein (432aa)
Aryl-beta-glucosidase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I063_9FIRM
Aryl-beta-glucosidase {ECO:0000313|EMBL:CCY30141.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
aryl-beta-glucosidase
L3_132_000M1_scaffold_140_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1545..2756
DNA (1212bp) protein (404aa)
AraC family transcriptional regulator n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HK69_9FIRM
AraC family transcriptional regulator {ECO:0000313|EMBL:CCY30140.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
AraC family transcriptional regulator
L3_132_000M1_scaffold_140_3
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2775..3734)
DNA (960bp) protein (320aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia sp. CAG:100 RepID=R7R129_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDF44374.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
AraC family transcriptional regulator
L3_132_000M1_scaffold_140_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3731..4579)
DNA (849bp) protein (283aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Hydrolase, NUDIX family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ98_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEG92004.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_140_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4698..5957)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HRY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30924.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
oxygen-independent coproporphyrinogen III oxidase
L3_132_000M1_scaffold_140_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6022..7833)
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Elongation factor 4 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZB7_9FIRM
GTP-binding protein LepA
L3_132_000M1_scaffold_140_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7971..9560)
DNA (1590bp) protein (530aa)
ATPase components of various ABC-type transport systems contain duplicated ATPase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1Q7_9FIRM
ATPase components of various ABC-type transport systems contain duplicated ATPase {ECO:0000313|EMBL:CCY30922.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_132_000M1_scaffold_140_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9602..10426)
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZC1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG92027.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_132_000M1_scaffold_140_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10510..11472)
DNA (963bp) protein (321aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMF2_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCY30920.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_132_000M1_scaffold_140_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11527..13101)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HRY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30919.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
extracellular solute-binding protein
L3_132_000M1_scaffold_140_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13213..13728)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92031.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_140_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13842..14480)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92033.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_140_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14785..15336)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30918.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_140_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15700..17502)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92035.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_140_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17874..19355)
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZD1_9FIRM
UDP-N-acetylmuramyl-tripeptide synthetase
L3_132_000M1_scaffold_140_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19467..20318)
DNA (852bp) protein (284aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZD2_9FIRM
L3_132_000M1_scaffold_140_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20406..21590)
DNA (1185bp) protein (395aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIH6_9FIRM
Cystathionine gamma-synthase {ECO:0000313|EMBL:CCY29388.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_140_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21874..22725
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HX97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29387.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
positive regulator for rhaBAD operon
L3_132_000M1_scaffold_140_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22787..24442)
DNA (1656bp) protein (552aa)
putative manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase/exopolyphosphatase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HY04_9FIRM
Inorganic pyrophosphatase/exopolyphosphatase {ECO:0000313|EMBL:CCY29386.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_140_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24458..25321)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HI22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29385.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_140_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25557..27029)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29384.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L3_132_000M1_scaffold_140_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27130..27612)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29383.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
PTS system IIA component, Glc family (TC 4.A.1)
L3_132_000M1_scaffold_140_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27645..28478)
DNA (834bp) protein (278aa)
Transcription antiterminator LicT n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZE4_9FIRM
Transcription antiterminator LicT {ECO:0000313|EMBL:EEG92050.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
transcriptional antiterminator, BglG family
L3_132_000M1_scaffold_140_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28764..29021)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HXZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29381.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Phosphotransferase System HPr (HPr) Family
L3_132_000M1_scaffold_140_25
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29042..30661)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=3 Tax=root RepID=C0FZE6_9FIRM
L3_132_000M1_scaffold_140_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30831..31571)
DNA (741bp) protein (247aa)
CutC family protein n=2 Tax=Roseburia RepID=C0FZE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29379.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Uncharacterized protein involved in copper resistance
L3_132_000M1_scaffold_140_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31799..35344)
DNA (3546bp) protein (1182aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIG4_9FIRM
L3_132_000M1_scaffold_140_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35541..38717)
DNA (3177bp) protein (1059aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HX86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29377.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
diguanylate cyclase (GGDEF) domain
L3_132_000M1_scaffold_140_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38906..40546
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HXZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29376.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_132_000M1_scaffold_140_30
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40621..42642)
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HI10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29375.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Displaying items 1-30 of 56 in total

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