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L3_132_000M1_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_429_1
unknown

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_132_000M1_scaffold_429_2
unknown

Not on your lists

comp(128..1240)
DNA (1113bp) protein (371aa)

This feature has no annotations

L3_132_000M1_scaffold_429_3
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1426..1584)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002F7AC0D
Uncharacterized protein {ECO:0000313|EMBL:EWM54247.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
GCN5-related N-acetyltransferase
L3_132_000M1_scaffold_429_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1978..5031)
DNA (3054bp) protein (1018aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
3 N domain protein glycosyl hydrolase family n=2 Tax=root RepID=R5I288_9FIRM
3 N domain protein glycosyl hydrolase family {ECO:0000313|EMBL:CCY30886.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_429_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5321..6658)
DNA (1338bp) protein (446aa)
Putative sensor histidine kinase VirS n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ46_9FIRM
Putative sensor histidine kinase VirS {ECO:0000313|EMBL:EEG95246.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_429_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6655..7365)
DNA (711bp) protein (237aa)
LytTr DNA-binding domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ45_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEG95245.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Response regulator of the LytR/AlgR family
L3_132_000M1_scaffold_429_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7525..7845
DNA (321bp) protein (107aa)
Rhodanese-like protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ44_9FIRM
Rhodanese-like protein {ECO:0000313|EMBL:EEG95244.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_429_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7869..9242)
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ43_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_429_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9438..10538)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I293_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30891.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
serine/threonine protein kinase
L3_132_000M1_scaffold_429_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10710..11669)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30892.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
HipA-like C-terminal domain./HipA-like N-terminal domain.
L3_132_000M1_scaffold_429_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11666..12001)
DNA (336bp) protein (112aa)
HipA domain protein n=2 Tax=Roseburia RepID=C0FQ39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30893.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
HipA N-terminal domain
L3_132_000M1_scaffold_429_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12005..12214)
DNA (210bp) protein (70aa)
Transcriptional regulator, y4mF family n=2 Tax=Roseburia RepID=C0FQ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30894.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Helix-turn-helix.
L3_132_000M1_scaffold_429_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12326..12544)
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=2 Tax=Roseburia RepID=C0FQ37_9FIRM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative carbon storage regulator
L3_132_000M1_scaffold_429_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12547..13008)
DNA (462bp) protein (154aa)
Flagellar assembly factor FliW n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I298_9FIRM
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar assembly factor fliW
L3_132_000M1_scaffold_429_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13089..14645)
DNA (1557bp) protein (519aa)
Flagellar hook-associated protein FlgL n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ35_9FIRM
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:EEG95235.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
flagellar hook-associated protein 3
L3_132_000M1_scaffold_429_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14678..16510)
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30898.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar hook-associated protein FlgK
L3_132_000M1_scaffold_429_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16583..18367)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HRV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30899.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
flagellar hook-associated protein FlgK
L3_132_000M1_scaffold_429_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18387..18899)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30900.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_429_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18915..19196)
DNA (282bp) protein (94aa)
Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ31_9FIRM
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:EEG95231.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Anti-sigma-28 factor, FlgM.
L3_132_000M1_scaffold_429_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19314..20912)
DNA (1599bp) protein (533aa)
Potassium/proton antiporter CPA1 family (TC 2.A.36) n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1N7_9FIRM
Potassium/proton antiporter CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CCY30902.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
potassium/proton antiporter, CPA1 family (TC 2.A.36)
L3_132_000M1_scaffold_429_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20995..21912)
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HMN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30903.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_429_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22154..23128)
DNA (975bp) protein (325aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HRW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30904.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_429_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23383..23649
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30905.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
diguanylate cyclase (GGDEF) domain
L3_132_000M1_scaffold_429_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23899..24585)
DNA (687bp) protein (229aa)
Topoisomerase DNA-binding C4 zinc finger domain protein n=2 Tax=Roseburia RepID=C0FNH3_9FIRM
Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EEG95865.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
exonuclease, DNA polymerase III, epsilon subunit family
L3_132_000M1_scaffold_429_25
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24639..25019)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95864.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_429_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25105..25236)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95863.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_429_27
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25230..25877)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95862.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_429_28
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26034..26252)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95861.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_429_29
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26307..26534)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95860.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_429_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26547..27935)
DNA (1389bp) protein (463aa)
MATE efflux family protein n=2 Tax=root RepID=C0FNG7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEG95859.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy