ggKbase home page

L3_132_000M1_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_489_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..620
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30253.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type cobalt transport system, ATPase component
L3_132_000M1_scaffold_489_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

773..1294
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30252.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
isochorismatase hydrolase
L3_132_000M1_scaffold_489_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1316..1621)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30251.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Branched-chain amino acid transport protein (AzlD).
L3_132_000M1_scaffold_489_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1651..2397)
DNA (747bp) protein (249aa)
AzlC protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ18_9FIRM
AzlC protein {ECO:0000313|EMBL:EEG92138.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L3_132_000M1_scaffold_489_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2693..3196
DNA (504bp) protein (168aa)
Hydrolase, NUDIX family n=2 Tax=Roseburia RepID=C0FZ17_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEG92137.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ADP-ribose pyrophosphatase
L3_132_000M1_scaffold_489_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3272..3841
DNA (570bp) protein (190aa)
acetyltransferase (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ16_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG92136.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_489_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3873..4379
DNA (507bp) protein (169aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Signal peptidase I LepB5 n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZS0_9FIRM
signal peptidase I LepB5
L3_132_000M1_scaffold_489_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4593..5528
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30246.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_489_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5812..6417
DNA (606bp) protein (202aa)
Putative abortive infection protein AbiGI n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKG5_9FIRM
Putative abortive infection protein AbiGI {ECO:0000313|EMBL:CCY30245.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_489_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6410..7306
DNA (897bp) protein (299aa)
Nucleotidyl transferase PF08843 family n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ40_9FIRM
Nucleotidyl transferase PF08843 family {ECO:0000313|EMBL:CCY30244.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Domain of unknown function (DUF1814).
L3_132_000M1_scaffold_489_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7611..8270
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ14_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG92134.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
amino acid ABC transporter permease
L3_132_000M1_scaffold_489_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8251..8925
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ13_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG92133.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
amino acid ABC transporter permease
L3_132_000M1_scaffold_489_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8932..9693
DNA (762bp) protein (254aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30241.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_489_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9716..10615
DNA (900bp) protein (300aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ11_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEG92131.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
amino acid ABC transporter substrate-binding protein
L3_132_000M1_scaffold_489_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10761..11489
DNA (729bp) protein (243aa)
LytTr DNA-binding domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ10_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEG92130.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Response regulator of the LytR/AlgR family
L3_132_000M1_scaffold_489_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11482..12768
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92129.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_132_000M1_scaffold_489_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12926..14806
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92128.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_489_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14821..15507
DNA (687bp) protein (229aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ07_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG92127.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC transporter family protein
L3_132_000M1_scaffold_489_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15608..16249
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92123.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_489_20
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16228..16422)
DNA (195bp) protein (65aa)
Transposase n=2 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72692.1}; Flags: Fragment;; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_132_000M1_scaffold_489_21
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16674..17618
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25228.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_132_000M1_scaffold_489_22
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17963..20200)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25229.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_132_000M1_scaffold_489_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20926..22059
DNA (1134bp) protein (378aa)
PP-loop family protein n=2 Tax=Roseburia RepID=C0FZ02_9FIRM
PP-loop family protein {ECO:0000313|EMBL:EEG92122.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_132_000M1_scaffold_489_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22157..22627)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30239.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
transcriptional regulator, XRE family
L3_132_000M1_scaffold_489_25
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(22593..22889)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N404_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07246.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_132_000M1_scaffold_489_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23092..23640
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30238.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
AbrB family transcriptional regulator
L3_132_000M1_scaffold_489_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23678..24736
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30237.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
DNA repair exonuclease
L3_132_000M1_scaffold_489_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24841..26319
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30236.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_489_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26456..27442
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30235.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_489_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27579..29636
DNA (2058bp) protein (686aa)
Penicillin-binding protein, 1A family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FYZ6_9FIRM
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EEG92116.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
penicillin-binding protein, 1A family
Displaying items 1-30 of 32 in total

View Taxonomy