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L3_132_000M1_scaffold_548

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_548_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU57_9FIRM
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein {ECO:0000313|EMBL:EEG93873.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_548_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(210..1115)
DNA (906bp) protein (302aa)
Dimethylallyltranstransferase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU56_9FIRM
Dimethylallyltranstransferase {ECO:0000313|EMBL:EEG93872.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
4-hydroxybenzoate octaprenyltransferase
L3_132_000M1_scaffold_548_3
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1122..2045)
DNA (924bp) protein (308aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Phosphatidylserine decarboxylase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU55_9FIRM
psd; phosphatidylserine decarboxylase
L3_132_000M1_scaffold_548_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1988..2641)
DNA (654bp) protein (218aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU54_9FIRM
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EEG93870.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphatidylserine synthase
L3_132_000M1_scaffold_548_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2638..3291)
DNA (654bp) protein (218aa)
Putative integral membrane protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU53_9FIRM
Putative integral membrane protein {ECO:0000313|EMBL:EEG93869.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
CDP-diglyceride synthetase
L3_132_000M1_scaffold_548_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3284..3637)
DNA (354bp) protein (118aa)
Prokaryotic diacylglycerol kinase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU52_9FIRM
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:EEG93868.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
diacylglycerol kinase-like protein
L3_132_000M1_scaffold_548_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3775..6243)
DNA (2469bp) protein (823aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU51_9FIRM
L3_132_000M1_scaffold_548_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6248..9412)
DNA (3165bp) protein (1055aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU50_9FIRM
L3_132_000M1_scaffold_548_9
unknown

Not on your lists

comp(9620..9772)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_132_000M1_scaffold_548_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9830..10822)
DNA (993bp) protein (331aa)
DHHA1 domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU48_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EEG93864.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Exopolyphosphatase-related proteins
L3_132_000M1_scaffold_548_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10844..11485)
DNA (642bp) protein (214aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29996.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_132_000M1_scaffold_548_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11526..13031)
DNA (1506bp) protein (502aa)
Carboxypeptidase Taq (M32) metallopeptidase {ECO:0000313|EMBL:EEG93862.1}; EC=3.4.17.19 {ECO:0000313|EMBL:EEG93862.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Zn-dependent carboxypeptidase (EC:3.4.17.19)
Carboxypeptidase Taq (M32) metallopeptidase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU46_9FIRM
L3_132_000M1_scaffold_548_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13138..13839)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93861.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_548_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13857..14525)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93860.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_132_000M1_scaffold_548_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14528..15403)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30000.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type multidrug transport system, ATPase component
L3_132_000M1_scaffold_548_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15528..15896)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU42_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG93858.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
transcriptional regulator, GntR family
L3_132_000M1_scaffold_548_17
unknown

Not on your lists

comp(16220..16405)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_132_000M1_scaffold_548_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16651..17490)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31202.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
CAAX amino terminal protease family.
L3_132_000M1_scaffold_548_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17944..18225)
DNA (282bp) protein (94aa)
Cell division topological specificity factor n=2 Tax=Roseburia RepID=C0FU40_9FIRM
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
cell division topological specificity factor MinE
L3_132_000M1_scaffold_548_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18241..19032)
DNA (792bp) protein (264aa)
Site-determining protein n=2 Tax=Roseburia RepID=C0FU39_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
septum site-determining protein MinD
L3_132_000M1_scaffold_548_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19058..19762)
DNA (705bp) protein (235aa)
Probable septum site-determining protein MinC n=2 Tax=Roseburia RepID=C0FU38_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
septum formation inhibitor
L3_132_000M1_scaffold_548_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20074..21348)
DNA (1275bp) protein (425aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU37_9FIRM
L3_132_000M1_scaffold_548_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21403..22035)
DNA (633bp) protein (211aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU36_9FIRM
phosphoribosylglycinamide formyltransferase
L3_132_000M1_scaffold_548_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22029..23054)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I3Q2_9FIRM
phosphoribosylformylglycinamidine cyclo-ligase
L3_132_000M1_scaffold_548_25
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23070..23570)
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU33_9FIRM
L3_132_000M1_scaffold_548_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24036..26063)
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31620.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_548_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26142..26474)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HU28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31619.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_548_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26549..27100)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HPG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31618.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Glycopeptide antibiotics resistance protein
L3_132_000M1_scaffold_548_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27048..27728)
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=2 Tax=Roseburia RepID=C0FU29_9FIRM
L3_132_000M1_scaffold_548_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28007..28789)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WBS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01611.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
Displaying 30 items

View Taxonomy