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L3_132_000M1_scaffold_558

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_558_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(743..2050)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91967.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
putative ATP/GTP-binding protein
L3_132_000M1_scaffold_558_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2352..3191
DNA (840bp) protein (280aa)
Hemerythrin HHE cation binding domain protein n=2 Tax=root RepID=C0FZN5_9FIRM
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:EEG91966.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hemerythrin
L3_132_000M1_scaffold_558_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3387..3797
DNA (411bp) protein (137aa)
Transcriptional regulator, MarR family n=2 Tax=Roseburia RepID=C0FZN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31489.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
transcriptional regulator, MarR family
L3_132_000M1_scaffold_558_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3802..4902
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HP56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31490.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_132_000M1_scaffold_558_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5001..6290)
DNA (1290bp) protein (430aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EEG91963.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EEG91963.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZN2_9FIRM
L3_132_000M1_scaffold_558_6
unknown

Not on your lists

comp(6235..6393)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_132_000M1_scaffold_558_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6536..6688)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91962.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_558_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6685..7980)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I3C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31492.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_558_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8000..9157)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HP65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31493.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC transporter permease
L3_132_000M1_scaffold_558_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9175..10947)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HTN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31494.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
RND family transporter
L3_132_000M1_scaffold_558_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10967..11863)
DNA (897bp) protein (299aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C0FZM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31495.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC transporter permease
L3_132_000M1_scaffold_558_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11860..12774)
DNA (915bp) protein (305aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C0FZM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31496.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC transporter permease
L3_132_000M1_scaffold_558_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12761..15193)
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91955.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC transporter substrate-binding protein
L3_132_000M1_scaffold_558_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15370..16482)
DNA (1113bp) protein (371aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2W4_9FIRM
glycoside hydrolase family protein
L3_132_000M1_scaffold_558_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16558..19707)
DNA (3150bp) protein (1050aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta galactosidase small chain n=2 Tax=Roseburia RepID=C0FZM2_9FIRM
L3_132_000M1_scaffold_558_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19727..20665)
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HJ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29568.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
AraC-type DNA-binding domain-containing proteins
L3_132_000M1_scaffold_558_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20724..20942)
DNA (219bp) protein (73aa)
Uncharacterized protein n=6 Tax=Roseburia RepID=C0FZM0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13096.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_132_000M1_scaffold_558_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20915..22765)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FZL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29570.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_558_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22884..23729)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HYM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29571.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_132_000M1_scaffold_558_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23729..25147)
DNA (1419bp) protein (473aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZL7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG91948.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_132_000M1_scaffold_558_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25317..26621)
DNA (1305bp) protein (435aa)
ABC transporter, solute-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZL6_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG91947.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Maltose-binding periplasmic proteins/domains
L3_132_000M1_scaffold_558_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26968..27771
DNA (804bp) protein (268aa)
Hydrolase carbon-nitrogen family n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HN56_9FIRM
Hydrolase carbon-nitrogen family {ECO:0000313|EMBL:CCY29574.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbon-nitrogen family hydrolase
L3_132_000M1_scaffold_558_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28020..28880
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30024.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
Displaying 23 items

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