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L3_132_000M1_scaffold_780

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_780_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..691
DNA (690bp) protein (230aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein (Fragment) n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G0C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91708.1}; Flags: Fragment;; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_780_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(862..2322)
DNA (1461bp) protein (487aa)
Flagellin and related hook-associated proteins n=1 Tax=Eubacterium rectale M104/1 RepID=D4JII8_9FIRM
Flagellin and related hook-associated proteins
Flagellin and related hook-associated proteins {ECO:0000313|EMBL:CBK93435.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_132_000M1_scaffold_780_3
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2469..2774)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95600.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Global regulator protein family.
L3_132_000M1_scaffold_780_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2969..3559
DNA (591bp) protein (197aa)
Site-specific recombinase, phage integrase family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP95_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG95599.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Site-specific recombinase XerD
L3_132_000M1_scaffold_780_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3707..4465)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HYP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29872.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Predicted xylanase/chitin deacetylase
L3_132_000M1_scaffold_780_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4493..5566)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29873.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative acetyltransferase
L3_132_000M1_scaffold_780_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5584..6597)
DNA (1014bp) protein (338aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG95596.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG95596.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP92_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L3_132_000M1_scaffold_780_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6612..7763)
DNA (1152bp) protein (384aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EEG95595.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EEG95595.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP91_9FIRM
L3_132_000M1_scaffold_780_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8229..9344)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29876.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
A/G-specific DNA glycosylase
L3_132_000M1_scaffold_780_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9826..10629
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP89_9FIRM
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EEG95593.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
3-hydroxybutyryl-coA dehydratase
L3_132_000M1_scaffold_780_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10842..12143)
DNA (1302bp) protein (434aa)
MATE efflux family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP88_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEG95592.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
MATE efflux family protein
L3_132_000M1_scaffold_780_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12187..13083)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I087_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30402.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
family 3 extracellular solute-binding protein
L3_132_000M1_scaffold_780_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13142..13951)
DNA (810bp) protein (270aa)
ABC transporter, ATP-binding protein n=2 Tax=Roseburia RepID=C0FP86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30401.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
glnQ1; glutamine transport ATP-binding protein GlnQ
L3_132_000M1_scaffold_780_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13989..14741)
DNA (753bp) protein (251aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP85_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG95589.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
glnP1; glutamine transport system permease protein GlnP
L3_132_000M1_scaffold_780_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15226..16233
DNA (1008bp) protein (336aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEG95588.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEG95588.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP84_9FIRM
L3_132_000M1_scaffold_780_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16496..17575
DNA (1080bp) protein (360aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Histidinol-phosphate aminotransferase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP83_9FIRM
histidinol-phosphate aminotransferase
L3_132_000M1_scaffold_780_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17916..18728
DNA (813bp) protein (271aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLA6_9FIRM
L3_132_000M1_scaffold_780_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18826..20136
DNA (1311bp) protein (437aa)
Cyclomaltodextrinase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I083_9FIRM
Cyclomaltodextrinase {ECO:0000313|EMBL:CCY30397.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Glycosidases
L3_132_000M1_scaffold_780_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20605..21024)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FP79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30396.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_132_000M1_scaffold_780_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21473..21628)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G079_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91750.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_132_000M1_scaffold_780_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21676..22503)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0G080_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29669.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Predicted ATPase
Displaying 21 items

View Taxonomy