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L3_133_000G1_scaffold_42

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Displaying items 1-30 of 167 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_42_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XHR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19153.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L3_133_000G1_scaffold_42_2
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

794..1633
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68769.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Putative phage replication protein RstA
L3_133_000G1_scaffold_42_3
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1643..1849
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80861.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Tn916 ORF1 excisionase
L3_133_000G1_scaffold_42_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1926..3116
DNA (1191bp) protein (397aa)
Transposase Int-Tn n=3 Tax=Clostridium difficile RepID=T2TIK0_CLODI
Integrase {ECO:0000313|EMBL:ERT51223.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
Site-specific recombinase XerD
L3_133_000G1_scaffold_42_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3096..3848)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BZU6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20006.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative transposase OrfB
L3_133_000G1_scaffold_42_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3881..4174)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JS71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33095.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_133_000G1_scaffold_42_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4922..5887)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DLP8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80611.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
transposase and inactivated derivatives IS30 family-like protein
L3_133_000G1_scaffold_42_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5835..6236)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88626.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_133_000G1_scaffold_42_9
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6531..7121)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YBI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59610.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
transposase
L3_133_000G1_scaffold_42_10
unknown

Not on your lists

comp(7349..7444)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_133_000G1_scaffold_42_11
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8382..8705
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80025.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
helix-turn-helix domain-containing protein
L3_133_000G1_scaffold_42_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11169..12416)
DNA (1248bp) protein (416aa)
Transposase n=2 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ48_9FIRM
Transposase {ECO:0000313|EMBL:EGX75628.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
transposase mutator type
L3_133_000G1_scaffold_42_13
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12576..13607)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6M1P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AKG34761.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
hypothetical protein
L3_133_000G1_scaffold_42_14
unknown

Not on your lists

14586..14753
DNA (168bp) protein (56aa)

This feature has no annotations

L3_133_000G1_scaffold_42_15
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

15166..15714
DNA (549bp) protein (183aa)
uridine kinase id=3761187 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
uridine kinase
Tax=GWF2_Clostridiales_36_10_curated
L3_133_000G1_scaffold_42_16
unknown

Not on your lists

15789..16748
DNA (960bp) protein (320aa)

This feature has no annotations

L3_133_000G1_scaffold_42_17

Not on your lists

16750..17847
DNA (1098bp) protein (366aa)
Radical SAM protein n=1 Tax=uncultured bacterium RepID=K1XRQ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL83670.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Radical SAM domain-containing protein
L3_133_000G1_scaffold_42_18
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17840..18721
DNA (882bp) protein (294aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7D1_9CLOT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGD49379.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
glycosyl transferase family protein
L3_133_000G1_scaffold_42_19
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18737..19831
DNA (1095bp) protein (365aa)
3-dehydroquinate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAE2
3,7-dideoxy-D-threo-hepto-2, 6-diulosonate synthase {ECO:0000313|EMBL:GAE86733.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
3-dehydroquinate synthase
L3_133_000G1_scaffold_42_20
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19852..20652
DNA (801bp) protein (267aa)
deoxyribose-phosphate aldolase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAEC
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000313|EMBL:GAE86718.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
L3_133_000G1_scaffold_42_21
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20639..22045
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002F7EC5F
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ETT65444.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
hypothetical protein
L3_133_000G1_scaffold_42_22
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22064..23194
DNA (1131bp) protein (377aa)
Radical SAM domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7C6_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EGD49374.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
Heme biosynthesis protein
L3_133_000G1_scaffold_42_23
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23191..24024
DNA (834bp) protein (278aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7C8_9CLOT
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:EGD49376.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L3_133_000G1_scaffold_42_24
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24122..24394
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0NZ47_WEEVC
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
L3_133_000G1_scaffold_42_25
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

24404..26125
DNA (1722bp) protein (574aa)
Bacillorin synthetase b id=4160784 bin=GWF2_OP9_related_35_9 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
amino acid adenylation protein
Tax=GWF2_RBX1_35_9_curated
L3_133_000G1_scaffold_42_26
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26131..27099
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002FE1C6C
ABC transporter ATPase subunit {ECO:0000313|EMBL:ETT53116.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
ABC transporter ATPase
L3_133_000G1_scaffold_42_27
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27123..27923
DNA (801bp) protein (267aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FHA2_9CLOT
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EMS69221.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ABC-type transport system, permease
L3_133_000G1_scaffold_42_28
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27927..28727
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9SZS6_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:EPY11377.1}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
ABC transporter permease
L3_133_000G1_scaffold_42_29
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29146..30144
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JAI1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67775.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_133_000G1_scaffold_42_30
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30478..31191
DNA (714bp) protein (238aa)
LytTr DNA-binding domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G421_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDR47473.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Response regulator of the LytR/AlgR family
Displaying items 1-30 of 167 in total

View Taxonomy
NameRatio
Clostridiales
88.02%
unknown
7.19%
Bacillales
2.99%
Thermoanaerobacterales
0.60%
Lactobacillales
0.60%
Erysipelotrichales
0.60%
Clostridiales: 0.8802395209580839unknown: 0.0718562874251497Bacillales: 0.029940119760479042Erysipelotrichales: 0.005988023952095809Lactobacillales: 0.005988023952095809Thermoanaerobacterales: 0.005988023952095809Clostridiales