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L3_133_000G1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_204_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

118..651
DNA (534bp) protein (178aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVH9_9PORP
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDD13340.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_204_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

733..1896
DNA (1164bp) protein (388aa)
Acyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAG0_9PORP
Acyltransferase {ECO:0000313|EMBL:CDD13341.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acyltransferase
L3_133_000G1_scaffold_204_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2557..3693
DNA (1137bp) protein (379aa)
Glycosyltransferase group 4 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4M3_9PORP
Glycosyltransferase group 4 family {ECO:0000313|EMBL:CDD13342.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase
L3_133_000G1_scaffold_204_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3708..4916
DNA (1209bp) protein (403aa)
Nucleotide sugar dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPV6_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDD13343.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative UDP-ManNAc dehydrogenase
L3_133_000G1_scaffold_204_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4927..6456
DNA (1530bp) protein (510aa)
Polysaccharide biosynthesis protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2J7_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD13344.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_204_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6459..7433
DNA (975bp) protein (325aa)
Glycosyltransferase group 1 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVI6_9PORP
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD13345.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_133_000G1_scaffold_204_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7411..8700
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13346.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000G1_scaffold_204_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8687..9736
DNA (1050bp) protein (350aa)
Glycosyltransferase group 1 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4M7_9PORP
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD13347.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_204_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9796..10695
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13348.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_204_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10698..11126
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z8C5_9PORP
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDD13349.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetyltransferase
L3_133_000G1_scaffold_204_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11123..11830
DNA (708bp) protein (236aa)
Glycosyltransferase WecB/TagA/CpsF family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVJ3_9PORP
Glycosyltransferase WecB/TagA/CpsF family {ECO:0000313|EMBL:CDD13350.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_133_000G1_scaffold_204_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11842..11988
DNA (147bp) protein (49aa)
UDP-GlcNAc 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAH1_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD13351.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000G1_scaffold_204_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11970..12428
DNA (459bp) protein (153aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4N2_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD13352.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UDP-GlcNAc 2-epimerase
L3_133_000G1_scaffold_204_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12386..12838
DNA (453bp) protein (151aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPW4_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD13353.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000G1_scaffold_204_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12835..15279
DNA (2445bp) protein (815aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AKH1_9PORP
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:EDN84493.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
capsule polysaccharide export protein
L3_133_000G1_scaffold_204_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15284..16372
DNA (1089bp) protein (363aa)
Chain length determinant protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAH8_9PORP
Chain length determinant protein {ECO:0000313|EMBL:CDD13356.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
capsular polysaccharide biosynthesis protein
L3_133_000G1_scaffold_204_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16421..19267)
DNA (2847bp) protein (949aa)
GHMP kinase, N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AKH3_9PORP
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EDN84495.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
fkp; bifunctional fucokinase/L-fucose-1-P-guanylyltransferase
L3_133_000G1_scaffold_204_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19495..20118
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z7N4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13358.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
mpi; multiple promoter invertase
L3_133_000G1_scaffold_204_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20810..21316
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Y2S7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13359.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_204_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21313..21981
DNA (669bp) protein (223aa)
Pyridoxal phosphate enzyme YggS family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVK6_9PORP
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDD13360.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_204_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22067..23044
DNA (978bp) protein (326aa)
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase 2 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAI3_9PORP
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:CDD13361.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000G1_scaffold_204_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23233..23598
DNA (366bp) protein (122aa)
Transcriptional regulator, MarR family n=4 Tax=Parabacteroides RepID=A7AKI1_9PORP
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDD13362.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_133_000G1_scaffold_204_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23663..26107
DNA (2445bp) protein (815aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Parabacteroides RepID=A7AKI2_9PORP
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN84504.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
pyridine nucleotide-disulfide oxidoreductase
L3_133_000G1_scaffold_204_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26287..27561)
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=3 Tax=Parabacteroides RepID=A7AKI4_9PORP
Serine--tRNA ligase {ECO:0000313|EMBL:CDD13365.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000G1_scaffold_204_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28168..28710)
DNA (543bp) protein (181aa)
NlpC/P60 family protein n=3 Tax=Parabacteroides RepID=A7AKI6_9PORP
NlpC/P60 family protein {ECO:0000313|EMBL:EDN84508.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lipoprotein
L3_133_000G1_scaffold_204_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28788..29054)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=4 Tax=Parabacteroides RepID=A7AKI7_9PORP
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rpmA; 50S ribosomal protein L27
L3_133_000G1_scaffold_204_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(29077..29394)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=7 Tax=Parabacteroides RepID=A7AKI8_9PORP
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rplU; 50S ribosomal protein L21
L3_133_000G1_scaffold_204_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29526..32261)
DNA (2736bp) protein (912aa)
Alpha-L-rhamnosidase N-terminal domain protein n=3 Tax=Parabacteroides RepID=A7AKI9_9PORP
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EDN84511.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha-L-rhamnosidase N-terminal domain-containing protein
L3_133_000G1_scaffold_204_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33250..36582
DNA (3333bp) protein (1111aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7AKJ1_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN84513.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-linked outer membrane protein, SusC/RagA family
L3_133_000G1_scaffold_204_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36602..38506
DNA (1905bp) protein (635aa)
SusD family protein n=2 Tax=Parabacteroides merdae RepID=A7AKJ2_9PORP
SusD family protein {ECO:0000313|EMBL:EDN84514.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
SusD family protein
Displaying items 1-30 of 103 in total

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