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L3_133_000G1_scaffold_215

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Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_215_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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166..1278
DNA (1113bp) protein (371aa)
Hydantoinase/oxoprolinase family protein n=113 Tax=Clostridium difficile RepID=T3ITD5_CLODC
Hydantoinase/oxoprolinase family protein {ECO:0000313|EMBL:EQE65330.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Group I intron
L3_133_000G1_scaffold_215_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1441..1983)
DNA (543bp) protein (181aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T2TIV7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99396.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_133_000G1_scaffold_215_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2131..2415)
DNA (285bp) protein (95aa)
Uncharacterized protein n=203 Tax=Clostridium difficile RepID=G6BXW2_CLODI
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CCL29926.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_133_000G1_scaffold_215_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2478..3242)
DNA (765bp) protein (255aa)
putative acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CKH11112.1}; Putative acyltransferase {ECO:0000313|EMBL:CDT42655.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CDT42655.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Acyltransferase n=175 Tax=Clostridium difficile RepID=G6BXW1_CLODI
L3_133_000G1_scaffold_215_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3524..3790)
DNA (267bp) protein (89aa)
Uncharacterized protein n=195 Tax=Clostridium difficile RepID=T3GZI7_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQH99399.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_133_000G1_scaffold_215_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3832..4641)
DNA (810bp) protein (270aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=116 Tax=Clostridium difficile RepID=T3GXY1_CLODC
Transcriptional regulator, AraC family
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH11155.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDS87488.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_133_000G1_scaffold_215_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4958..5239
DNA (282bp) protein (94aa)
Uncharacterized protein n=97 Tax=Clostridium difficile RepID=T3H271_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21911.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_133_000G1_scaffold_215_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5503..5757
DNA (255bp) protein (85aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2YBD6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99402.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_133_000G1_scaffold_215_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5802..6125
DNA (324bp) protein (108aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2U423_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99403.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
uncharacterised protein
L3_133_000G1_scaffold_215_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6684..6878)
DNA (195bp) protein (65aa)
Uncharacterized protein n=160 Tax=Clostridium difficile RepID=F3Y5U0_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21915.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_133_000G1_scaffold_215_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7252..8871)
DNA (1620bp) protein (540aa)
Na+/Pi-cotransporter family protein n=125 Tax=Clostridium difficile RepID=T3GZY4_CLODC
putative sodium:phosphate symporter
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EHJ26449.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_133_000G1_scaffold_215_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9691..9882
DNA (192bp) protein (64aa)
Uncharacterized protein n=207 Tax=Clostridium difficile RepID=F3Y5U1_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ26451.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_133_000G1_scaffold_215_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9971..10783)
DNA (813bp) protein (271aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=202 Tax=Clostridium difficile RepID=C9XR08_CLODC
ATP-binding protein
Mrp-like family protein {ECO:0000313|EMBL:EHJ26452.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_133_000G1_scaffold_215_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11205..12356
DNA (1152bp) protein (384aa)
Acetyltransferase family protein n=52 Tax=Clostridium difficile RepID=T3GW33_CLODC
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CCL21920.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_133_000G1_scaffold_215_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12474..13112
DNA (639bp) protein (213aa)
5-methyltetrahydrofolate--homocysteine S-methyltransferase domain protein {ECO:0000313|EMBL:EQE65285.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EQE65285.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
5-methyltetrahydrofolate--homocysteine S-methyltransferase domain protein n=180 Tax=Clostridium difficile RepID=C9XR10_CLODC
corrinoid protein
L3_133_000G1_scaffold_215_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13113..14135
DNA (1023bp) protein (341aa)
Uroporphyrinogen decarboxylase family protein n=84 Tax=Clostridium difficile RepID=T3H197_CLODC
hemE; Uroporphyrinogen decarboxylase (URO-D)
Uroporphyrinogen decarboxylase (URO-D) {ECO:0000313|EMBL:CCL29941.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_133_000G1_scaffold_215_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14125..14745
DNA (621bp) protein (207aa)
Vitamin B12 dependent methionine synthase, activation domain protein n=41 Tax=Clostridium difficile RepID=T3GZ17_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68602.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_133_000G1_scaffold_215_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14872..15558)
DNA (687bp) protein (229aa)
HAD hydrolase, IA, variant 1 family protein n=70 Tax=Clostridium difficile RepID=T3GXQ7_CLODC
putative hydrolase
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:EQE65310.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_133_000G1_scaffold_215_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15572..16117)
DNA (546bp) protein (182aa)
Helix-turn-helix family protein n=193 Tax=Clostridium difficile RepID=T3GW38_CLODC
Transcriptional regulator, HTH-type
Helix-turn-helix family protein {ECO:0000313|EMBL:EQE65275.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_133_000G1_scaffold_215_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16327..17592
DNA (1266bp) protein (422aa)
Citrate transporter n=63 Tax=Clostridium difficile RepID=G6BXU4_CLODI
gluconate permease
Putative gluconate permease {ECO:0000313|EMBL:CBE04340.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_133_000G1_scaffold_215_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17679..19673
DNA (1995bp) protein (665aa)
Two-component sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
His Kinase A domain protein n=27 Tax=Clostridium difficile RepID=T3GVY2_CLODC
L3_133_000G1_scaffold_215_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19673..20995
DNA (1323bp) protein (441aa)
AAA domain family protein n=70 Tax=Clostridium difficile RepID=C9XR17_CLODC
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL29947.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_133_000G1_scaffold_215_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21274..22560
DNA (1287bp) protein (429aa)
Glycine/sarcosine/betaine reductase complex,protein B, alpha and beta subunits {ECO:0000313|EMBL:CCL21929.1}; EC=1.21.4.- {ECO:0000313|EMBL:CCL21929.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Glycine reductase complex component B subunits alpha and beta n=166 Tax=Clostridium difficile RepID=C9XR18_CLODC
sarcosine reductase complex component B subunit alpha
L3_133_000G1_scaffold_215_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22646..23695
DNA (1050bp) protein (350aa)
Sarcosine reductase complex component B subunit beta {ECO:0000313|EMBL:CCL21930.1}; EC=1.21.4.3 {ECO:0000313|EMBL:CCL21930.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Glycine reductase complex component B subunit gamma n=148 Tax=Clostridium difficile RepID=T3H0A3_CLODC
sarcosine reductase complex component B subunit alpha
L3_133_000G1_scaffold_215_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23723..23953
DNA (231bp) protein (77aa)
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein n=204 Tax=Clostridium difficile RepID=T3H0S5_CLODC
sarcosine reductase complex component B subunit alpha
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein {ECO:0000313|EMBL:EQI84527.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_133_000G1_scaffold_215_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24230..24961
DNA (732bp) protein (244aa)
LytTr DNA-binding domain protein n=2 Tax=Clostridium difficile RepID=G6BXT8_CLODI
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EHJ24855.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Two-component response regulator
L3_133_000G1_scaffold_215_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24963..26321
DNA (1359bp) protein (453aa)
Two-component sensor histidine kinase n=114 Tax=Clostridium difficile RepID=U3WBZ1_CLODI
Two-component sensor histidine kinase {ECO:0000313|EMBL:CCL21933.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Two-component sensor histidine kinase
L3_133_000G1_scaffold_215_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26360..26845
DNA (486bp) protein (162aa)
Uncharacterized protein n=46 Tax=Clostridium difficile RepID=T3UK59_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ24853.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
conserved hypothetical protein
L3_133_000G1_scaffold_215_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27108..27344)
DNA (237bp) protein (79aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T3K922_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL21936.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L3_133_000G1_scaffold_215_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27500..27724)
DNA (225bp) protein (75aa)
Ferrous iron transport protein n=217 Tax=Clostridium difficile RepID=Q186V3_CLOD6
ferrous iron transport protein A
Ferrous iron transport protein {ECO:0000313|EMBL:CCL21937.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Displaying items 1-30 of 93 in total

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