ggKbase home page

L3_133_000G1_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_221_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(214..627)
DNA (414bp) protein (138aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X5N0_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10527.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_133_000G1_scaffold_221_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

725..1138
DNA (414bp) protein (138aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=C7X5N1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64271.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_133_000G1_scaffold_221_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1150..1461
DNA (312bp) protein (104aa)
Anti-sigma factor antagonist n=8 Tax=Bacteroidales RepID=A6LHU4_PARD8
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_133_000G1_scaffold_221_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1519..2478)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AZL5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS57093.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_133_000G1_scaffold_221_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2634..3788
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z330_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21182.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
dehydrogenase
L3_133_000G1_scaffold_221_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3802..4794
DNA (993bp) protein (331aa)
Sugar phosphate isomerase/epimerase n=8 Tax=Bacteroidales RepID=A6LHU7_PARD8
sugar phosphate isomerase/epimerase
AP endonuclease, family 2 {ECO:0000313|EMBL:EEU53205.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_133_000G1_scaffold_221_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4827..5828
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AC58_9PORP
Icc family phosphohydrolase {ECO:0000313|EMBL:CDB47115.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
phosphohydrolase
L3_133_000G1_scaffold_221_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5932..6828
DNA (897bp) protein (299aa)
Diaminopimelate dehydrogenase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZZF6_9PORP
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EKN21179.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
oxidoreductase
L3_133_000G1_scaffold_221_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6924..7757
DNA (834bp) protein (278aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Prolipoprotein diacylglyceryl transferase n=9 Tax=Bacteroidales RepID=A6LHV0_PARD8
prolipoprotein diacylglyceryl transferase
L3_133_000G1_scaffold_221_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7820..9016
DNA (1197bp) protein (399aa)
Flavoprotein n=5 Tax=Parabacteroides RepID=A6LHV1_PARD8
flavoprotein
Uncharacterized protein {ECO:0000313|EMBL:EKN21177.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_133_000G1_scaffold_221_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9173..9985
DNA (813bp) protein (271aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Glucosamine-6-phosphate deaminase n=9 Tax=Bacteroidales RepID=NAGB_PARD8
L3_133_000G1_scaffold_221_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10213..12630)
DNA (2418bp) protein (806aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AC52_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27464.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_133_000G1_scaffold_221_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12718..14238)
DNA (1521bp) protein (507aa)
SusD family protein n=9 Tax=Bacteroidales RepID=C7X5P2_9PORP
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS57207.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_133_000G1_scaffold_221_14
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14269..17484)
DNA (3216bp) protein (1072aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroidales RepID=C7X5P3_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ85171.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_133_000G1_scaffold_221_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17575..17757
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z322_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27461.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_133_000G1_scaffold_221_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17901..19259)
DNA (1359bp) protein (453aa)
Outer membrane efflux protein n=6 Tax=Bacteroidales RepID=C7X5P4_9PORP
outer membrane transport/efflux protein
Outer membrane channel protein {ECO:0000313|EMBL:KEJ85173.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_133_000G1_scaffold_221_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19272..20393)
DNA (1122bp) protein (374aa)
Membrane fusion efflux protein n=4 Tax=Bacteroidales RepID=A6LHV7_PARD8
membrane fusion efflux protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEU53215.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_133_000G1_scaffold_221_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20429..21685)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZZE7_9PORP
FtsX-like permease family protein {ECO:0000313|EMBL:KDS57134.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
efflux ABC transporter permease
L3_133_000G1_scaffold_221_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21697..22974)
DNA (1278bp) protein (426aa)
Efflux ABC transporter, permease protein n=5 Tax=Bacteroidales RepID=C7X5P7_9PORP
ABC transporter permease
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEU53217.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_133_000G1_scaffold_221_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22967..23650)
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroidales RepID=D7IMG8_9BACE
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKN21167.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_133_000G1_scaffold_221_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24086..25267
DNA (1182bp) protein (394aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Phosphoribosylglycinamide formyltransferase 2 n=5 Tax=Bacteroidales RepID=PURT_PARD8
phosphoribosylglycinamide formyltransferase
L3_133_000G1_scaffold_221_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25622..27100)
DNA (1479bp) protein (493aa)
WD40-like protein n=3 Tax=Parabacteroides RepID=E1YPP1_9PORP
WD40-like protein {ECO:0000313|EMBL:EFK64290.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_133_000G1_scaffold_221_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27108..28880)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZZE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21164.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_133_000G1_scaffold_221_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28891..30357)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LHW5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ85183.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_133_000G1_scaffold_221_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30367..32112)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7X5Q3_9PORP
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABR45280.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_133_000G1_scaffold_221_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32342..34201)
DNA (1860bp) protein (620aa)
SusD family protein n=6 Tax=Bacteroidales RepID=C7X5Q4_9PORP
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS57122.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_133_000G1_scaffold_221_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34233..37640)
DNA (3408bp) protein (1136aa)
SusC/RagA family TonB-linked outer membrane protein n=5 Tax=Bacteroidales RepID=K6AC37_9PORP
hypothetical protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN27449.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_133_000G1_scaffold_221_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38199..41582
DNA (3384bp) protein (1128aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=K5ZZD4_9PORP
Outer membrane protein {ECO:0000313|EMBL:CDB49319.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_133_000G1_scaffold_221_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41619..43493
DNA (1875bp) protein (625aa)
RagB/SusD domain-containing protein n=4 Tax=Bacteroidales RepID=D7IMH7_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI10554.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_133_000G1_scaffold_221_30
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43620..44342
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z310_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49321.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
metal dependent hydrolase
Displaying items 1-30 of 91 in total

View Taxonomy