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L3_133_000G1_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_297_1
unknown

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35..127
DNA (93bp) protein (31aa)

This feature has no annotations

L3_133_000G1_scaffold_297_2
unknown

Not on your lists

201..419
DNA (219bp) protein (73aa)

This feature has no annotations

L3_133_000G1_scaffold_297_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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512..2080
DNA (1569bp) protein (523aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=A8S0M4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14107.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
recombinase
L3_133_000G1_scaffold_297_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2287..3189)
DNA (903bp) protein (301aa)
YaeC family lipoprotein n=4 Tax=Clostridium RepID=N9X814_9CLOT
YaeC family lipoprotein {ECO:0000313|EMBL:ENZ11456.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
NLPA lipoprotein
L3_133_000G1_scaffold_297_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3246..3911)
DNA (666bp) protein (222aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D314_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG54281.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000G1_scaffold_297_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3914..4963)
DNA (1050bp) protein (350aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETM4_9FIRM
ABC transporter
L3_133_000G1_scaffold_297_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5377..6780)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41857.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dipeptidase
L3_133_000G1_scaffold_297_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6807..7259)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKW0_9CLOT
Yqey-like protein {ECO:0000313|EMBL:KJJ69010.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_133_000G1_scaffold_297_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7301..8905)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIG3_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptide chain release factor 3
L3_133_000G1_scaffold_297_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8964..10166)
DNA (1203bp) protein (401aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41862.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_133_000G1_scaffold_297_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10229..10969
DNA (741bp) protein (247aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Type III pantothenate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5II70_9CLOT
transcriptional activator, Baf family
L3_133_000G1_scaffold_297_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11382..12158
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=4 Tax=Clostridium bolteae RepID=A8RI17_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L3_133_000G1_scaffold_297_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12220..12999)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FCE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01284.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
aminoglycoside phosphotransferase
L3_133_000G1_scaffold_297_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13226..13522)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FCE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18109.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_133_000G1_scaffold_297_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13482..13610)
DNA (129bp) protein (43aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AQB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18109.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_133_000G1_scaffold_297_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13737..13934
DNA (198bp) protein (66aa)
AraC family transcriptional regulator n=3 Tax=Clostridium RepID=N9YM82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18111.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
AraC family transcriptional regulator
L3_133_000G1_scaffold_297_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14027..15010
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61350.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_133_000G1_scaffold_297_18
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15102..15842)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKU0_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L3_133_000G1_scaffold_297_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15884..16735)
DNA (852bp) protein (284aa)
Putative sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK2_9FIRM
Putative sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:EEQ61346.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptidase U4 sporulation factor SpoIIGA
L3_133_000G1_scaffold_297_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16965..18293)
DNA (1329bp) protein (443aa)
Cell division protein FtsZ n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYR5_9CLOT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell division protein FtsZ
L3_133_000G1_scaffold_297_21
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18485..19225)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97830.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Cell division septal protein
L3_133_000G1_scaffold_297_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19225..20532)
DNA (1308bp) protein (436aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=3 Tax=Clostridium bolteae RepID=R0AS26_9CLOT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_133_000G1_scaffold_297_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20611..22086)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41877.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell cycle protein
L3_133_000G1_scaffold_297_24
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22100..23458)
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K1X1_9CLOT
L3_133_000G1_scaffold_297_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23498..24466)
DNA (969bp) protein (323aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5INK2_9CLOT
phospho-N-acetylmuramoyl-pentapeptide-transferase
L3_133_000G1_scaffold_297_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24546..26309)
DNA (1764bp) protein (588aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RI55_9CLOT
Stage V sporulation protein D {ECO:0000313|EMBL:ENZ51907.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000G1_scaffold_297_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26363..28696)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41883.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_133_000G1_scaffold_297_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28674..29204)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKS8_9CLOT
Cell division protein FtsL {ECO:0000313|EMBL:KJJ69042.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Septum formation initiator.
L3_133_000G1_scaffold_297_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29267..30211)
DNA (945bp) protein (315aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYT1_9CLOT
L3_133_000G1_scaffold_297_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30211..30636)
DNA (426bp) protein (142aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:7 RepID=R5INL1_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
MraZ protein
Displaying items 1-30 of 80 in total

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