ggKbase home page

L3_133_000G1_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_385_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..1166)
DNA (1164bp) protein (388aa)
YibE/F-like protein n=2 Tax=Erysipelotrichaceae RepID=B0N3L0_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:CCZ35442.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_133_000G1_scaffold_385_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1213..3726)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RLB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35440.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Calcineurin-like phosphoesterase
L3_133_000G1_scaffold_385_3
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3997..4680)
DNA (684bp) protein (228aa)
HAD hydrolase, family IA n=1 Tax=Coprobacillus sp. D7 RepID=C3RLB8_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EHQ47840.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_133_000G1_scaffold_385_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4685..5347)
DNA (663bp) protein (221aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Erysipelotrichaceae RepID=B0N3K7_9FIRM
HAD-superfamily hydrolase {ECO:0000313|EMBL:CCZ35437.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hydrolase
L3_133_000G1_scaffold_385_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5421..6806)
DNA (1386bp) protein (462aa)
Aryl-phospho-beta-D-glucosidase BglH n=4 Tax=Erysipelotrichaceae RepID=B0N3K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35435.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
6-phospho-beta-glucosidase
L3_133_000G1_scaffold_385_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7211..8416)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R0K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47837.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Biotin carboxylase
L3_133_000G1_scaffold_385_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8429..9166)
DNA (738bp) protein (246aa)
Putative esterase n=2 Tax=Erysipelotrichaceae RepID=B0N3K4_9FIRM
Putative esterase {ECO:0000313|EMBL:CCZ35431.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
esterase
L3_133_000G1_scaffold_385_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9166..10356)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19025.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Biotin carboxylase
L3_133_000G1_scaffold_385_9
unknown

Not on your lists

comp(10301..10471)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_133_000G1_scaffold_385_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10496..11353)
DNA (858bp) protein (286aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=3 Tax=Coprobacillus RepID=C3RLB2_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EHQ47834.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_133_000G1_scaffold_385_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11374..12417)
DNA (1044bp) protein (348aa)
Twitching motility protein n=4 Tax=Erysipelotrichaceae RepID=B0N3K1_9FIRM
Twitching motility protein {ECO:0000313|EMBL:CCZ35425.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
type IV pilus retraction protein PilT
L3_133_000G1_scaffold_385_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12427..14097)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R0J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92246.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
type IV pilus assembly protein PilB
L3_133_000G1_scaffold_385_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14115..15539)
DNA (1425bp) protein (475aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3J9_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EDS19021.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative prepilin-type N-cleavage/methylation domain protein
L3_133_000G1_scaffold_385_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15577..16509)
DNA (933bp) protein (311aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N3J8_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CCZ35410.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000G1_scaffold_385_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16506..16970)
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35408.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000G1_scaffold_385_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16988..17620)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RRC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35407.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000G1_scaffold_385_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17613..18257)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19017.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_133_000G1_scaffold_385_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18266..19162)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R0J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92240.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
pilM; pilus assembly protein ATPase PilM
L3_133_000G1_scaffold_385_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19172..20365)
DNA (1194bp) protein (398aa)
Bacterial type II secretion system domain protein F n=4 Tax=Erysipelotrichaceae RepID=B0N3J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47824.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
pilC; type IV fimbrial assembly protein PilC
L3_133_000G1_scaffold_385_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20379..21143)
DNA (765bp) protein (255aa)
pilD; type IV prepilin-like leader peptidase PilD (EC:3.4.23.43)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RNM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35387.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000G1_scaffold_385_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21306..21728)
DNA (423bp) protein (141aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=2 Tax=Coprobacillus RepID=C3RNM1_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EHM92237.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_133_000G1_scaffold_385_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21900..22727)
DNA (828bp) protein (276aa)
DNA-binding helix-turn-helix protein n=4 Tax=Erysipelotrichaceae RepID=B0N3J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92236.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Predicted transcriptional regulators
L3_133_000G1_scaffold_385_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23147..24607)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N3I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47820.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_133_000G1_scaffold_385_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24790..26427)
DNA (1638bp) protein (546aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDS19010.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDS19010.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Alpha,alpha-phosphotrehalase n=2 Tax=Erysipelotrichaceae RepID=B0N3I8_9FIRM
treA; trehalose-6-phosphate hydrolase
L3_133_000G1_scaffold_385_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26444..28336)
DNA (1893bp) protein (631aa)
PTS system, trehalose-specific IIBC component n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R0I5_9FIRM
PTS system, trehalose-specific IIBC component {ECO:0000313|EMBL:EHM92233.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system trehalose transporter subunit IIABC
L3_133_000G1_scaffold_385_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28438..30246)
DNA (1809bp) protein (603aa)
MutS domain V protein n=2 Tax=Erysipelotrichaceae RepID=B0N3I6_9FIRM
MutS domain V protein {ECO:0000313|EMBL:EDS19008.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA mismatch repair protein
L3_133_000G1_scaffold_385_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30246..30959)
DNA (714bp) protein (238aa)
Trehalose operon repressor n=4 Tax=Erysipelotrichaceae RepID=B0N3I5_9FIRM
Trehalose operon repressor {ECO:0000313|EMBL:EHM92231.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
treR; trehalose operon repressor
L3_133_000G1_scaffold_385_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30994..31821)
DNA (828bp) protein (276aa)
HAD hydrolase, family IIB n=4 Tax=Erysipelotrichaceae RepID=B0N3I4_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDS19006.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_133_000G1_scaffold_385_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31838..32857)
DNA (1020bp) protein (340aa)
M42 glutamyl aminopeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N3I3_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EDS19005.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
peptidase M42 family protein
L3_133_000G1_scaffold_385_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33024..34529)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RNL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47813.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ErfK family protein
Displaying items 1-30 of 88 in total

View Taxonomy