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L3_133_000G1_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_403_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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168..1322
DNA (1155bp) protein (385aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7AJQ1_9PORP
two-component sensor histidine kinase
L3_133_000G1_scaffold_403_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1411..1998
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5ZKK9_9PORP
Putative ACR, COG1399 {ECO:0000313|EMBL:EDN84803.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000G1_scaffold_403_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2011..2196
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=14 Tax=Bacteroidales RepID=A7AJQ3_9PORP
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
50S ribosomal protein L32
L3_133_000G1_scaffold_403_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2302..3306
DNA (1005bp) protein (335aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=3 Tax=Parabacteroides RepID=A7AJQ4_9PORP
3-oxoacyl-ACP synthase
L3_133_000G1_scaffold_403_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3290..4180
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUS5_9PORP
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
era; GTP-binding protein Era
L3_133_000G1_scaffold_403_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4209..5522
DNA (1314bp) protein (438aa)
GTPase Der n=2 Tax=Parabacteroides RepID=K5ZJR4_9PORP
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
engA; GTP-binding protein EngA
L3_133_000G1_scaffold_403_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5722..7497)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZJ60_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11526.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_133_000G1_scaffold_403_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7607..8680)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNS5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11030.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
heme biosynthesis protein
L3_133_000G1_scaffold_403_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8677..9153)
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AJR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84811.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000G1_scaffold_403_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9448..11295
DNA (1848bp) protein (616aa)
ABC transporter, ATP-binding protein n=3 Tax=Parabacteroides RepID=A7AJR2_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN84813.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_133_000G1_scaffold_403_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11342..12436
DNA (1095bp) protein (365aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BH83_9PORP
Endoglucanase C {ECO:0000313|EMBL:CDD14698.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
family 5 glycosyl hydrolase
L3_133_000G1_scaffold_403_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12445..14874
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8H3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14697.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_133_000G1_scaffold_403_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14875..16077)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEE4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14696.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_403_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16117..16794)
DNA (678bp) protein (226aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Parabacteroides RepID=A7AJR6_9PORP
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_133_000G1_scaffold_403_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16882..17634)
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phosphate ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6D0_9PORP
phosphate ABC transporter ATP-binding protein
L3_133_000G1_scaffold_403_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17648..18535)
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein PstA n=4 Tax=Parabacteroides RepID=A7AJR8_9PORP
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EDN84819.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter permease
L3_133_000G1_scaffold_403_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18544..19734)
DNA (1191bp) protein (397aa)
Phosphate ABC transporter, permease protein PstC n=4 Tax=Parabacteroides RepID=A7AJR9_9PORP
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EDN84820.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter permease
L3_133_000G1_scaffold_403_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20365..21561
DNA (1197bp) protein (399aa)
Glycosyl hydrolase family 88 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZF5_9PORP
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:CDD14690.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glucuronyl hydrolase
L3_133_000G1_scaffold_403_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21571..22788
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6C6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14689.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_403_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22822..23664
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=3 Tax=Parabacteroides RepID=K6A785_9PORP
L3_133_000G1_scaffold_403_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23694..24485
DNA (792bp) protein (264aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=3 Tax=Parabacteroides RepID=A7AJS4_9PORP
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN84825.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_133_000G1_scaffold_403_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24657..25787
DNA (1131bp) protein (377aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AJS5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84826.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Predicted ATPase (AAA+ superfamily)
L3_133_000G1_scaffold_403_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25851..27347)
DNA (1497bp) protein (499aa)
Succinate CoA transferase n=2 Tax=Parabacteroides merdae RepID=A7AJS6_9PORP
Succinate CoA transferase {ECO:0000313|EMBL:EDN84827.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetyl-CoA hydrolase/transferase
L3_133_000G1_scaffold_403_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27418..27846)
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AJS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11889.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000G1_scaffold_403_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28097..29467
DNA (1371bp) protein (457aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Parabacteroides merdae RepID=A7AJS8_9PORP
(dimethylallyl)adenosine tRNA methylthiotransferase
L3_133_000G1_scaffold_403_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29580..29729)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZKI9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84830.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_133_000G1_scaffold_403_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30597..34463
DNA (3867bp) protein (1289aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6AUG1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84833.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000G1_scaffold_403_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34886..35764
DNA (879bp) protein (293aa)
Cell division protein FtsX n=2 Tax=Parabacteroides RepID=K6AUZ2_9PORP
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cell division protein FtsX
L3_133_000G1_scaffold_403_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35769..36011
DNA (243bp) protein (81aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7AJT4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84835.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000G1_scaffold_403_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36008..36808
DNA (801bp) protein (267aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Undecaprenyl-diphosphatase n=3 Tax=Parabacteroides RepID=A7AJT5_9PORP
undecaprenol kinase
Displaying items 1-30 of 83 in total

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