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L3_133_000G1_scaffold_412

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_412_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(248..2458)
DNA (2211bp) protein (737aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33061.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
antirepressor regulating drug resistance protein
L3_133_000G1_scaffold_412_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2451..2825)
DNA (375bp) protein (125aa)
Transcriptional regulator, BlaI/MecI/CopY family n=3 Tax=Clostridiales RepID=G9YST8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33060.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
CopY family transcriptional regulator
L3_133_000G1_scaffold_412_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2928..3755)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7B7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56721.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3768..4580)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33058.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
amino acid amidase
L3_133_000G1_scaffold_412_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4577..5329)
DNA (753bp) protein (251aa)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=2 Tax=Clostridiales RepID=H1CEW7_9FIRM
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:EHO33057.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5652..7130
DNA (1479bp) protein (493aa)
Carbon starvation protein CstA n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YST4_9FIRM
Carbon starvation protein CstA {ECO:0000313|EMBL:EHM45130.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative carbon starvation protein CstA
L3_133_000G1_scaffold_412_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7286..7756
DNA (471bp) protein (157aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YST3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EHM45129.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sigma-70 family RNA polymerase sigma factor
L3_133_000G1_scaffold_412_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7753..8721
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YST2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56716.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_133_000G1_scaffold_412_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9237..10154
DNA (918bp) protein (306aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BV92_9CLOT
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ERI76165.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
amino acid ABC transporter amino acid-binding protein
L3_133_000G1_scaffold_412_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10158..10976
DNA (819bp) protein (273aa)
Putative glutamine ABC transporter, permease protein GlnP n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56714.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
amino acid ABC transporter permease protein
L3_133_000G1_scaffold_412_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10973..11716
DNA (744bp) protein (248aa)
Histidine transport ATP-binding protein HisP n=2 Tax=Clostridiales RepID=G9YSS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33050.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
amino acid ABC transporter ATP-binding protein
L3_133_000G1_scaffold_412_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11703..13076)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BV97_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI76170.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative efflux protein, MATE family
L3_133_000G1_scaffold_412_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13453..13998)
DNA (546bp) protein (182aa)
Ribosomal subunit interface protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS75_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EHM46580.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative ribosome-associated protein
L3_133_000G1_scaffold_412_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14135..14557)
DNA (423bp) protein (141aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56710.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14570..14953)
DNA (384bp) protein (128aa)
UPF0251 protein HMPREF0372_02383 n=3 Tax=Clostridiales RepID=G9YS77_9FIRM
UPF0251 protein HMPREF0995_02984 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15244..15492
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM46583.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_133_000G1_scaffold_412_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15621..17006
DNA (1386bp) protein (462aa)
Putative permease n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS79_9FIRM
Putative permease {ECO:0000313|EMBL:EHM46584.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Permeases
L3_133_000G1_scaffold_412_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17050..18207)
DNA (1158bp) protein (386aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C2V8_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:ERI61706.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
amidohydrolase
L3_133_000G1_scaffold_412_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18377..19603)
DNA (1227bp) protein (409aa)
serine protease (EC:3.4.21.-)
Trypsin n=2 Tax=Clostridiales RepID=U2ANP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33041.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000G1_scaffold_412_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19636..21087)
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEV0_9FIRM
L3_133_000G1_scaffold_412_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21084..21779)
DNA (696bp) protein (232aa)
Putative transcriptional regulatory protein ResD n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BXK0_9CLOT
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:ERI61702.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
OmpR family two-component response regulator
L3_133_000G1_scaffold_412_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21864..23039)
DNA (1176bp) protein (392aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C2V3_9CLOT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ERI61701.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative cation efflux protein
L3_133_000G1_scaffold_412_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23220..24653
DNA (1434bp) protein (478aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ANN5_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:ERI61700.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Fe-S oxidoreductase
L3_133_000G1_scaffold_412_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24691..25638)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2A7H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI61699.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000G1_scaffold_412_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25761..27926
DNA (2166bp) protein (722aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33033.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative transcription accessory protein
L3_133_000G1_scaffold_412_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28247..28342
DNA (96bp) protein (32aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C317_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI61771.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_133_000G1_scaffold_412_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28339..28719
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ANT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33032.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28791..29123)
DNA (333bp) protein (111aa)
Cupin domain protein n=2 Tax=Clostridiales RepID=U2BNW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33031.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29141..29503)
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YL99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33030.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_000G1_scaffold_412_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29520..30137)
DNA (618bp) protein (206aa)
Repressor LexA n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CET9_9FIRM
Repressor LexA {ECO:0000313|EMBL:EHO33029.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phage repressor like XRE family transcriptional regulator
Displaying items 1-30 of 63 in total

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