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L3_133_000G1_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_413_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
ParB-like partition protein n=3 Tax=Clostridium clostridioforme RepID=N9Y9T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03882.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ParB-like partition proteins
L3_133_000G1_scaffold_413_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(395..1231)
DNA (837bp) protein (279aa)
ATPases involved in chromosome partitioning n=14 Tax=Firmicutes RepID=D4K2I5_9FIRM
ATPases involved in chromosome partitioning
Uncharacterized protein {ECO:0000313|EMBL:EHE98633.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_133_000G1_scaffold_413_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1759..2100
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78735.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Arsenate reductase and related proteins, glutaredoxin family
L3_133_000G1_scaffold_413_4
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2063..2698
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7D7S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD86674.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L3_133_000G1_scaffold_413_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2732..3097
DNA (366bp) protein (122aa)
Transcriptional regulator, HxlR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4X7_9CLOT
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EEG72745.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
HxlR family transcriptional regulator
L3_133_000G1_scaffold_413_6
unknown

Not on your lists

3181..3366
DNA (186bp) protein (62aa)

This feature has no annotations

L3_133_000G1_scaffold_413_7
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3675..5012)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DMC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81368.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
putative efflux protein, MATE family
L3_133_000G1_scaffold_413_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5302..8067
DNA (2766bp) protein (922aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44223.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sigma-54 interacting domain-containing protein
L3_133_000G1_scaffold_413_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8079..8564
DNA (486bp) protein (162aa)
PTS system mannose/fructose/sorbose transporter subunit IIB (EC:2.7.1.69)
PTS family mannose/fructose/sorbose porter component IIB n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV46_9CLOT
PTS family mannose/fructose/sorbose porter component IIB {ECO:0000313|EMBL:CCY44224.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_133_000G1_scaffold_413_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8591..9361
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44225.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_133_000G1_scaffold_413_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9354..10181
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44226.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
L3_133_000G1_scaffold_413_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10248..11471
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44227.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Neutral/alkaline non-lysosomal ceramidase
L3_133_000G1_scaffold_413_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11482..11889
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44228.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphotransferase system, mannose/fructose-specific component IIA
L3_133_000G1_scaffold_413_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11969..12670)
DNA (702bp) protein (234aa)
Two-component system, OmpR family, KDP operon response regulator KdpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH21_9FIRM
Two-component system, OmpR family, KDP operon response regulator KdpE {ECO:0000313|EMBL:EGJ45660.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_000G1_scaffold_413_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12731..13378)
DNA (648bp) protein (216aa)
TrkA-N domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILP7_9CLOT
TrkA-N domain protein {ECO:0000313|EMBL:CCY41244.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
K+ transport systems, NAD-binding component
L3_133_000G1_scaffold_413_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13397..14740)
DNA (1344bp) protein (448aa)
Potassium uptake protein TrkH family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGI0_9CLOT
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CCY41243.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Trk-type K+ transport systems, membrane components
L3_133_000G1_scaffold_413_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14889..15719)
DNA (831bp) protein (277aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWZ6_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY41241.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AraC family transcriptional regulator
L3_133_000G1_scaffold_413_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16168..16386
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RVA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15304.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_133_000G1_scaffold_413_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16379..16681
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98654.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
spore coat protein CotJB
L3_133_000G1_scaffold_413_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16681..17298
DNA (618bp) protein (206aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RV99_9CLOT
Spore coat protein JC {ECO:0000313|EMBL:ENZ35077.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
manganese containing catalase
L3_133_000G1_scaffold_413_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17390..18403)
DNA (1014bp) protein (338aa)
Glucan-binding domain (YG repeat)-like protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AV27_9CLOT
Glucan-binding domain (YG repeat)-like protein {ECO:0000313|EMBL:CDD45702.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Glucan-binding domain (YG repeat)-like protein
L3_133_000G1_scaffold_413_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18428..23845)
DNA (5418bp) protein (1806aa)
Putative fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZX94_9CLOT
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDD45701.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
coagulation factor 5/8 type domain-containing protein
L3_133_000G1_scaffold_413_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24121..25332)
DNA (1212bp) protein (404aa)
Phosphopentomutase {ECO:0000313|EMBL:KJJ73393.1}; EC=5.4.2.7 {ECO:0000313|EMBL:KJJ73393.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Phosphopentomutase (EC:5.4.2.7)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJH3_9CLOT
L3_133_000G1_scaffold_413_24
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25332..26495)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ73392.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
alanine racemase
L3_133_000G1_scaffold_413_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26496..27590)
DNA (1095bp) protein (365aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJJ73391.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJJ73391.1};; EC=4.4.1.16 {ECO:0000313|EMBL:KJJ73391.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJH5_9CLOT
hypothetical protein
L3_133_000G1_scaffold_413_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27607..28497)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98402.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
aryldialkylphosphatase
L3_133_000G1_scaffold_413_27
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28528..29580)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Carnobacterium sp. (strain 17-4) RepID=F4BSC5_CARS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB30195.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
L3_133_000G1_scaffold_413_28
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29577..29933)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Enterococcus faecium RepID=R1ZZB5_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOK12292.1}; TaxID=1169278 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0372.;"
hypothetical protein
L3_133_000G1_scaffold_413_29
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29945..31264)
DNA (1320bp) protein (440aa)
UPI000305FFB2 related cluster n=1 Tax=unknown RepID=UPI000305FFB2
Uncharacterized protein {ECO:0000313|EMBL:KJJ73388.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_133_000G1_scaffold_413_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31329..31694)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AHB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58305.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
PRD domain-containing protein
Displaying items 1-30 of 96 in total

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