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L3_133_000G1_scaffold_420

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_420_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(664..1542)
DNA (879bp) protein (293aa)
IncFII family plasmid replication initiator RepA n=16 Tax=Enterobacteriaceae RepID=I6E3Z9_SHIBO
IncFII family plasmid replication initiator RepA {ECO:0000313|EMBL:EIQ38741.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;"
replication protein
L3_133_000G1_scaffold_420_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2245..2886
DNA (642bp) protein (214aa)
TraB n=50 Tax=Escherichia coli RepID=C1J8K9_ECOLX
transcriptional activator RfaH
Uncharacterized protein {ECO:0000313|EMBL:EQP96599.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L3_133_000G1_scaffold_420_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3027..3689
DNA (663bp) protein (221aa)
TraC n=56 Tax=Enterobacteriaceae RepID=C1J8L0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK23129.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_133_000G1_scaffold_420_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3956..4576
DNA (621bp) protein (207aa)
Inner membrane protein YqiJ n=90 Tax=Enterobacteriaceae RepID=C1J8L1_ECOLX
yqiJ; Inner membrane protein yqiJ
Uncharacterized protein {ECO:0000313|EMBL:EQP96597.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L3_133_000G1_scaffold_420_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4603..6297
DNA (1695bp) protein (565aa)
Inner membrane protein YqiK n=54 Tax=Enterobacteriaceae RepID=C1J8L2_ECOLX
yqiK; Inner membrane protein yqiK
Inner membrane protein yqiK {ECO:0000313|EMBL:EHV47961.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
L3_133_000G1_scaffold_420_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6378..6620
DNA (243bp) protein (81aa)
Uncharacterized protein n=84 Tax=Escherichia coli RepID=G4VUD9_ECOLX
Plasmid conjugative transfer protein PilI
Uncharacterized protein {ECO:0000313|EMBL:EQP41079.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_133_000G1_scaffold_420_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7298..8368
DNA (1071bp) protein (357aa)
Type IV pilus lipoprotein n=9 Tax=Enterobacteriaceae RepID=I6E405_SHIBO
Toxin co-regulated pilus biosynthesis Q family protein {ECO:0000313|EMBL:KDY60451.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
Toxin co-regulated pilus biosynthesis protein Q
L3_133_000G1_scaffold_420_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8372..8809
DNA (438bp) protein (146aa)
Conjugative transfer protein n=48 Tax=Enterobacteriaceae RepID=E0WH41_ECOLX
PilM
PilM {ECO:0000313|EMBL:KDZ15462.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_133_000G1_scaffold_420_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8841..10460
DNA (1620bp) protein (540aa)
Type IV pilus formation outer membrane protein n=9 Tax=Enterobacteriaceae RepID=E0WH40_ECOLX
Type IV pilus formation outer membrane protein {ECO:0000313|EMBL:CBM42300.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
bfpB; Bundle-forming pilus B
L3_133_000G1_scaffold_420_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10481..11776
DNA (1296bp) protein (432aa)
Pilus assembly protein n=28 Tax=Escherichia coli RepID=G4VUD3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQY78802.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
Pilin accessory protein (PilO)
L3_133_000G1_scaffold_420_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11766..12224
DNA (459bp) protein (153aa)
Pilus assembly protein n=53 Tax=Enterobacteriaceae RepID=G4VUD2_ECOLX
type IV pilus biogenesis protein PilP
Type IV pilus biogenesis protein PilP {ECO:0000313|EMBL:EQP41074.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_133_000G1_scaffold_420_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12328..13836
DNA (1509bp) protein (503aa)
PilQ n=13 Tax=Enterobacteriaceae RepID=B3ASZ7_ECO57
Type II/IV secretion system family protein {ECO:0000313|EMBL:KDZ15466.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
epsE; Type II traffic warden ATPase
L3_133_000G1_scaffold_420_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13838..14932
DNA (1095bp) protein (365aa)
Conjugative transfer inner membrane protein n=50 Tax=Enterobacteriaceae RepID=G4VUD0_ECOLX
type IV pilin biogenesis protein
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:KDY51174.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L3_133_000G1_scaffold_420_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14994..15530
DNA (537bp) protein (179aa)
Conjugative transfer prepilin n=56 Tax=Enterobacteriaceae RepID=G4VUC9_ECOLX
hypothetical protein
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:KDZ15468.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_133_000G1_scaffold_420_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15575..16060
DNA (486bp) protein (162aa)
PilT n=7 Tax=Escherichia coli RepID=B3AT00_ECO57
Uncharacterized protein {ECO:0000313|EMBL:EQZ93915.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
invasion protein IagB
L3_133_000G1_scaffold_420_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16076..16702
DNA (627bp) protein (209aa)
PilU n=53 Tax=Enterobacteriaceae RepID=C1J8M3_ECOLX
Flp pilus assembly protein, protease CpaA
Type IV leader peptidase family protein {ECO:0000313|EMBL:KDY95202.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_133_000G1_scaffold_420_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16720..18081
DNA (1362bp) protein (454aa)
Minor pilin subunit n=53 Tax=Enterobacteriaceae RepID=C1J8M4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY78809.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_133_000G1_scaffold_420_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18554..19375
DNA (822bp) protein (274aa)
Conjugal transfer protein n=8 Tax=Escherichia coli RepID=E0WH29_ECOLX
Putative conjugal transfer protein {ECO:0000313|EMBL:EZJ60338.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
hypothetical protein
L3_133_000G1_scaffold_420_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19477..20679
DNA (1203bp) protein (401aa)
Conjugative transfer protein n=61 Tax=Enterobacteriaceae RepID=C1J8M7_ECOLX
hypothetical protein
F plasmid transfer operon, TraF, family protein {ECO:0000313|EMBL:KDY95205.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_133_000G1_scaffold_420_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20783..21241
DNA (459bp) protein (153aa)
Conjugative transfer protein n=54 Tax=Enterobacteriaceae RepID=C1J8M8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK23112.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_133_000G1_scaffold_420_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21238..22074
DNA (837bp) protein (279aa)
Conjugative transfer protein n=56 Tax=Enterobacteriaceae RepID=C1J8M9_ECOLX
hypothetical protein
Putative traI {ECO:0000313|EMBL:KDZ15475.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_133_000G1_scaffold_420_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22058..23206
DNA (1149bp) protein (383aa)
Plasmid transfer ATPase TraJ n=40 Tax=Enterobacteriaceae RepID=C1J8N0_ECOLX
yggR; hypothetical protein
Plasmid transfer ATPase TraJ {ECO:0000313|EMBL:KDY95208.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_133_000G1_scaffold_420_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23203..23493
DNA (291bp) protein (97aa)
Conjugal transfer protein n=81 Tax=Enterobacteriaceae RepID=Q68JB3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY95209.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_133_000G1_scaffold_420_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23557..27618
DNA (4062bp) protein (1354aa)
traC; DNA primase TraC (EC:2.7.7.-)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=I6E421_SHIBO
Uncharacterized protein {ECO:0000313|EMBL:EQZ93808.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_133_000G1_scaffold_420_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27635..27985
DNA (351bp) protein (117aa)
Conjugal transfer protein n=81 Tax=Enterobacteriaceae RepID=C1J8N3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP41060.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_133_000G1_scaffold_420_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27997..28692
DNA (696bp) protein (232aa)
Conjugal transfer protein n=9 Tax=Escherichia coli RepID=E0WH18_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOX02484.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
Macrophage killing protein with similarity to conjugation protein
L3_133_000G1_scaffold_420_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28703..29677
DNA (975bp) protein (325aa)
Conjugal transfer protein n=8 Tax=Escherichia coli RepID=E0WH17_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQZ93811.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
hypothetical protein
L3_133_000G1_scaffold_420_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29681..31012
DNA (1332bp) protein (444aa)
TraO n=5 Tax=Enterobacteriaceae RepID=F5P545_SHIFL
Putative conjugal transfer protein {ECO:0000313|EMBL:KDZ15482.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
hypothetical protein
L3_133_000G1_scaffold_420_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31009..31722
DNA (714bp) protein (238aa)
Conjugal transfer protein n=30 Tax=Enterobacteriaceae RepID=C1J8N7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQZ93813.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
hypothetical protein
L3_133_000G1_scaffold_420_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31719..32249
DNA (531bp) protein (177aa)
Conjugal transfer protein n=32 Tax=Enterobacteriaceae RepID=Q68JA6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQZ93814.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
hypothetical protein
Displaying items 1-30 of 68 in total

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