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L3_133_000G1_scaffold_726

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_726_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..945
DNA (945bp) protein (315aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B2Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72519.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000G1_scaffold_726_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(986..1555)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55418.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Chromate transport protein ChrA
L3_133_000G1_scaffold_726_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1552..2175)
DNA (624bp) protein (208aa)
Chromate transport protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55417.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Chromate transporter
L3_133_000G1_scaffold_726_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2332..4257)
DNA (1926bp) protein (642aa)
putative NAD(+) synthetase (EC:6.3.5.-)
NAD+ synthase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CZ01_9CLOT
NAD+ synthase {ECO:0000313|EMBL:ERI72516.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_133_000G1_scaffold_726_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4344..5483)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34022.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_133_000G1_scaffold_726_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6759..8528
DNA (1770bp) protein (590aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBK0_9FIRM
L3_133_000G1_scaffold_726_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8705..8962)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DEZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78111.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000G1_scaffold_726_8
unknown

Not on your lists

comp(9132..9236)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_133_000G1_scaffold_726_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9585..10559
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C0T2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78110.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000G1_scaffold_726_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10573..11052
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM39849.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_133_000G1_scaffold_726_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11093..12355)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55410.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Hemolysins and related proteins containing CBS domains
L3_133_000G1_scaffold_726_12
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12585..12827
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12607.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_133_000G1_scaffold_726_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13991..14464)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95049.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted transcriptional regulators
L3_133_000G1_scaffold_726_14

Not on your lists

comp(14680..14934)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BVJ7_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75842.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
L3_133_000G1_scaffold_726_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15001..15165
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RUJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62328.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_133_000G1_scaffold_726_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

15196..16173
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27202.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_133_000G1_scaffold_726_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16224..16769
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62359.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_133_000G1_scaffold_726_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16813..17184
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q3D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62360.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Protein of unknown function (DUF2765).
L3_133_000G1_scaffold_726_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17217..17396
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRD9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40364.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_133_000G1_scaffold_726_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17483..18199
DNA (717bp) protein (239aa)
Phage tail tape measure protein, TP901 family n=2 Tax=Oscillibacter RepID=U2QL94_9FIRM
Phage tail tape measure protein, TP901 family {ECO:0000313|EMBL:ERK62361.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
phage tail tape measure protein, TP901 family
L3_133_000G1_scaffold_726_21
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18157..18534
DNA (378bp) protein (126aa)
Phage terminase large subunit (GpA) n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY60_RUMGN
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_133_000G1_scaffold_726_22
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18547..18780
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VKE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16638.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_133_000G1_scaffold_726_23
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18785..19888
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F1K3_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_133_000G1_scaffold_726_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19889..20230)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=3 Tax=Clostridiales RepID=G9YVX9_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rplQ; ribosomal protein L17
L3_133_000G1_scaffold_726_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20381..21328)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Clostridiales RepID=H1CBJ2_9FIRM
L3_133_000G1_scaffold_726_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21410..22012)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVY1_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpsD; 30S ribosomal protein S4
L3_133_000G1_scaffold_726_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22031..22432)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=3 Tax=Clostridiales RepID=G9YVY2_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsK; 30S ribosomal protein S11
L3_133_000G1_scaffold_726_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22448..22816)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=3 Tax=Clostridiales RepID=G9YVY3_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpsM; 30S ribosomal protein S13
L3_133_000G1_scaffold_726_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22836..22949)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=7 Tax=Firmicutes RepID=U2D9M3_9CLOT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
rpmJ; 50S ribosomal protein L36
L3_133_000G1_scaffold_726_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23474..23677)
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 n=3 Tax=Clostridiales RepID=H1CBI7_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
infA; translation initiation factor IF-1
Displaying items 1-30 of 64 in total

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