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L3_133_000G1_scaffold_980

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_980_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(206..931)
DNA (726bp) protein (242aa)
DNA repair protein RecO n=6 Tax=Bacteroides RepID=C6YZ30_9BACE
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DNA repair protein
L3_133_000G1_scaffold_980_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


1289..1543
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=15 Tax=Bacteroides RepID=RS20_BACV8
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L3_133_000G1_scaffold_980_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1552..1707)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UMB2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27614.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_133_000G1_scaffold_980_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1990..3954
DNA (1965bp) protein (655aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DNA gyrase subunit B n=9 Tax=Bacteroides RepID=A6L063_BACV8
DNA gyrase B subunit
L3_133_000G1_scaffold_980_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4050..4193)
DNA (144bp) protein (48aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UMB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY80233.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_133_000G1_scaffold_980_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4282..6960
DNA (2679bp) protein (893aa)
4-alpha-glucanotransferase {ECO:0000313|EMBL:KDS33189.1}; EC=2.4.1.25 {ECO:0000313|EMBL:KDS33189.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Putative 4-alpha-glucanotransferase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3R0_BACVU
4-alpha-glucanotransferase
L3_133_000G1_scaffold_980_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7034..8389
DNA (1356bp) protein (452aa)
Transporter, major facilitator family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3Q9_BACVU
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFG19632.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
sugar transporter
L3_133_000G1_scaffold_980_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8599..8742)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9R4J1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33187.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_133_000G1_scaffold_980_9
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9095..9580
DNA (486bp) protein (162aa)
Transcriptional regulator n=8 Tax=Bacteroides RepID=A6L060_BACV8
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEO62261.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_133_000G1_scaffold_980_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9993..12056
DNA (2064bp) protein (688aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3Q6_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG19629.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_133_000G1_scaffold_980_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12196..12441
DNA (246bp) protein (82aa)
Conserved domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3Q5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS33183.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_133_000G1_scaffold_980_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12565..12861
DNA (297bp) protein (99aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3Q3V8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33181.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_133_000G1_scaffold_980_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12968..14563)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9UC18_BACVU
Putative regulatory protein SusR {ECO:0000313|EMBL:KDS56867.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
regulatory protein SusR
L3_133_000G1_scaffold_980_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14812..16662
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFF4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02521.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase family protein
L3_133_000G1_scaffold_980_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16704..18920
DNA (2217bp) protein (739aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3Q2_BACVU
Alpha-glucosidase {ECO:0000313|EMBL:KDS33178.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
alpha-glucosidase
L3_133_000G1_scaffold_980_16
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18973..19152
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UMB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14692.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_133_000G1_scaffold_980_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19320..22400
DNA (3081bp) protein (1027aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3Q1_BACVU
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFG19624.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
membrane protein
L3_133_000G1_scaffold_980_18
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22412..24034
DNA (1623bp) protein (541aa)
SusD family protein n=5 Tax=Bacteroides RepID=C3RCI5_9BACE
SusD family protein {ECO:0000313|EMBL:EEZ20356.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
membrane protein
L3_133_000G1_scaffold_980_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24071..25228
DNA (1158bp) protein (386aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3Q3U9_9BACE
SusE outer membrane family protein {ECO:0000313|EMBL:KDS56862.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
membrane protein
L3_133_000G1_scaffold_980_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25251..26666
DNA (1416bp) protein (472aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3RCI7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS56861.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_133_000G1_scaffold_980_21
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26798..28879
DNA (2082bp) protein (694aa)
Alpha amylase, catalytic domain protein n=7 Tax=Bacteroides RepID=C6YZ44_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB25284.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
alpha-amylase
L3_133_000G1_scaffold_980_22
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28893..30035
DNA (1143bp) protein (381aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Glycosyl hydrolase, family 53 n=3 Tax=Bacteroides RepID=C6YZ45_9BACE
arabinogalactan endo-1,4-beta-galactosidase
L3_133_000G1_scaffold_980_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30132..31112)
DNA (981bp) protein (327aa)
Outer membrane insertion signal domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3H3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS33171.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
histidine kinase
L3_133_000G1_scaffold_980_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31135..32991)
DNA (1857bp) protein (619aa)
Peptidase, S8/S53 family n=3 Tax=Bacteroides RepID=C6YZ47_9BACE
Protease {ECO:0000313|EMBL:EFV69339.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
peptidase
L3_133_000G1_scaffold_980_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33193..34380)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L052_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79948.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_133_000G1_scaffold_980_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34447..35028)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P405_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19614.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_133_000G1_scaffold_980_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35131..35454)
DNA (324bp) protein (108aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L3_133_000G1_scaffold_980_28
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35432..36562)
DNA (1131bp) protein (377aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L3_133_000G1_scaffold_980_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37012..37992
DNA (981bp) protein (327aa)
Transcriptional regulator, FucR n=4 Tax=Bacteroides RepID=A6L049_BACV8
transcriptional regulator, FucR
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EET13919.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_133_000G1_scaffold_980_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38014..39789
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
fucI; sugar isomerase (EC:5.3.1.25)
L-fucose isomerase n=13 Tax=Bacteroides RepID=FUCI_BACV8
Displaying items 1-30 of 112 in total

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