ggKbase home page

L3_133_000G1_scaffold_1108

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_1108_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

189..1091
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035F48D4
Putative dipicolinate synthase, A subunit {ECO:0000313|EMBL:EGB92992.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
dpaA; dipicolinate synthase subunit A
L3_133_000G1_scaffold_1108_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

1107..1685
DNA (579bp) protein (193aa)
dipicolinate synthase n=1 Tax=Blautia producta RepID=UPI00037A0734
Dipicolinic acid synthetase {ECO:0000313|EMBL:CDC42498.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
spoVFB; dipicolinate synthase subunit B
L3_133_000G1_scaffold_1108_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1722..3572
DNA (1851bp) protein (617aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Clostridium sp. D5 RepID=F0YYY4_9CLOT
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EGB92990.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_133_000G1_scaffold_1108_4
unknown

Not on your lists

3787..4191
DNA (405bp) protein (135aa)

This feature has no annotations

L3_133_000G1_scaffold_1108_5
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4188..4385
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XJ83_9CLOT
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AIQ26716.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
L3_133_000G1_scaffold_1108_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4661..5545)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CU60_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI70811.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
AraC family transcriptional regulator
L3_133_000G1_scaffold_1108_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5983..8259
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TZW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62382.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_133_000G1_scaffold_1108_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8283..9977
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31463.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter substrate-binding protein
L3_133_000G1_scaffold_1108_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10054..10965
DNA (912bp) protein (304aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ05_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN31462.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter permease
L3_133_000G1_scaffold_1108_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10978..11874
DNA (897bp) protein (299aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ04_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN31461.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter permease
L3_133_000G1_scaffold_1108_11
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13056..14393
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FFQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00897.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
putative efflux protein, MATE family
L3_133_000G1_scaffold_1108_12
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14536..15120
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L8W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62706.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Beta-lactamase class A
L3_133_000G1_scaffold_1108_13
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

15110..15325
DNA (216bp) protein (72aa)
Putative beta-lactamase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BLM4_9FIRM
Putative beta-lactamase {ECO:0000313|EMBL:CDA65008.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Beta-lactamase class A
L3_133_000G1_scaffold_1108_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15497..16555)
DNA (1059bp) protein (353aa)
Putative sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YV87_9CLOT
Putative sugar ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:EGB94807.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative periplasmic binding proteins and sugar binding domain of the LacI family
L3_133_000G1_scaffold_1108_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16820..17893
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YV92_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94812.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_133_000G1_scaffold_1108_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17968..20004
DNA (2037bp) protein (679aa)
yicI; alpha-xylosidase YicI (EC:3.2.1.177)
Alpha-xylosidase n=1 Tax=Clostridium sp. D5 RepID=F0YV93_9CLOT
Alpha-xylosidase {ECO:0000313|EMBL:EGB94813.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_133_000G1_scaffold_1108_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20041..21312
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YV94_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94814.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_133_000G1_scaffold_1108_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21338..22840
DNA (1503bp) protein (501aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YV88_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EGB94808.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
secreted sugar binding protein
L3_133_000G1_scaffold_1108_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22912..23793
DNA (882bp) protein (294aa)
Sugar ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0YV89_9CLOT
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EGB94809.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_133_000G1_scaffold_1108_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23804..24631
DNA (828bp) protein (276aa)
Sugar ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0YV90_9CLOT
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EGB94810.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_133_000G1_scaffold_1108_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24648..25724
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YV91_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94811.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_133_000G1_scaffold_1108_22
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(25933..26703)
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BK78_9FIRM
L3_133_000G1_scaffold_1108_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26855..27514)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80974.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_133_000G1_scaffold_1108_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27772..28986
DNA (1215bp) protein (405aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=2 Tax=Lachnospiraceae RepID=F3AKK5_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EGG86981.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_133_000G1_scaffold_1108_25
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

29032..29259
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BZQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64676.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_133_000G1_scaffold_1108_26
unknown

Not on your lists

29284..29499
DNA (216bp) protein (72aa)

This feature has no annotations

L3_133_000G1_scaffold_1108_27
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29456..30373
DNA (918bp) protein (306aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBA9_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EET62240.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
MoxR-like ATPases
L3_133_000G1_scaffold_1108_28
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30357..32123
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62241.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Nitric oxide reductase activation protein
L3_133_000G1_scaffold_1108_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32139..33092
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22238.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_133_000G1_scaffold_1108_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33168..33317
DNA (150bp) protein (50aa)
Potassium uptake protein, TrkH family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJK9_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EEQ56784.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
potassium uptake protein, TrkH family
Displaying 30 items

View Taxonomy