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L3_133_000G1_scaffold_1307

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_1307_1
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(169..1023)
DNA (855bp) protein (285aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Cobalt import ATP-binding protein CbiO 1 n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BVY8_9FIRM
ABC transporter
L3_133_000G1_scaffold_1307_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(1020..2015)
DNA (996bp) protein (332aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJC7_9FIRM
ABC-type cobalt transport system, ATPase component
L3_133_000G1_scaffold_1307_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2086..2502
DNA (417bp) protein (139aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=D5Q9I6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK99212.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
hypothetical protein
L3_133_000G1_scaffold_1307_4
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2660..3688)
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SR04_CLOC7
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AIQ33405.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
L3_133_000G1_scaffold_1307_5
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3785..5419)
DNA (1635bp) protein (545aa)
AraC family transcriptional regulator n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SDB4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KJS50555.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
L3_133_000G1_scaffold_1307_6
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5412..7130)
DNA (1719bp) protein (573aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
Putative signal transduction protein with a C-terminal ATPase domain n=1 Tax=Clostridium sp. BNL1100 RepID=H2JHJ3_9CLOT
putative signal transduction protein with a C-terminal ATPase domain
L3_133_000G1_scaffold_1307_7
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7167..8942)
DNA (1776bp) protein (592aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
signal transduction protein (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFY8_9FIRM
L3_133_000G1_scaffold_1307_8
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8955..10094)
DNA (1140bp) protein (380aa)
ABC transporter periplasmic sugar-binding protein n=14 Tax=Vibrio nigripulchritudo RepID=F9TM35_9VIBR
putative ABC-type sugar transport system, periplasmic component
Putative ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CCO57626.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;"
L3_133_000G1_scaffold_1307_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10260..11315)
DNA (1056bp) protein (352aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=2 Tax=Clostridium RepID=D3AJM4_9CLOT
L3_133_000G1_scaffold_1307_10
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(11411..12769)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XSE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15434.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
gluconate transporter
L3_133_000G1_scaffold_1307_11
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13021..14505)
DNA (1485bp) protein (495aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
4-alpha-glucanotransferase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SR03_CLOC7
L3_133_000G1_scaffold_1307_12
unknown

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comp(14502..14645)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_133_000G1_scaffold_1307_13
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14763..15734)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N7L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79269.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
DMT superfamliy metabolite exporter
L3_133_000G1_scaffold_1307_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(15786..16940)
DNA (1155bp) protein (385aa)
Propanol dehydrogenase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIE3_9FIRM
Propanol dehydrogenase {ECO:0000313|EMBL:CDB94016.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Alcohol dehydrogenase, class IV
L3_133_000G1_scaffold_1307_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17162..17644)
DNA (483bp) protein (161aa)
Ribonuclease, Rne/Rng family n=1 Tax=Streptomyces sp. GBA 94-10 RepID=V4JQQ3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEG54732.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
tolA; cell envelope integrity inner membrane protein TolA
L3_133_000G1_scaffold_1307_16
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17631..18422)
DNA (792bp) protein (264aa)
ATPases involved in chromosome partitioning n=1 Tax=Blautia sp. CAG:257 RepID=R5WZU2_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDA05544.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
ATPases involved in chromosome partitioning
L3_133_000G1_scaffold_1307_17
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18644..19918)
DNA (1275bp) protein (425aa)
Major facilitator superfamily transporter n=2 Tax=Anaerostipes RepID=E5VY76_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDR98788.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
macrolide-efflux protein
L3_133_000G1_scaffold_1307_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20016..20684)
DNA (669bp) protein (223aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DTK0_CLOSO
TetR family transcriptional regulator {ECO:0000313|EMBL:CEN83917.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
TetR family transcriptional regulator
L3_133_000G1_scaffold_1307_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20775..21611)
DNA (837bp) protein (279aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding {ECO:0000313|EMBL:CBL25294.1}; EC=3.6.1.22 {ECO:0000313|EMBL:CBL25294.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding n=1 Tax=Ruminococcus torques L2-14 RepID=D4M232_9FIRM
L3_133_000G1_scaffold_1307_20
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(21744..22586)
DNA (843bp) protein (281aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CH95_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA64647.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Acetyltransferases, including N-acetylases of ribosomal proteins
L3_133_000G1_scaffold_1307_21
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22837..23583)
DNA (747bp) protein (249aa)
Aminoglycoside phosphotransferase n=7 Tax=Clostridium thermocellum RepID=A3DCI3_CLOTH
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABN51662.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_133_000G1_scaffold_1307_22
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23815..26436)
DNA (2622bp) protein (874aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Aldehyde-alcohol dehydrogenase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F5N6_CLOS4
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L3_133_000G1_scaffold_1307_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26812..27333)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X800_9CLOT
L3_133_000G1_scaffold_1307_24
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27725..29128
DNA (1404bp) protein (468aa)
Cation:amino acid symporter AgcS n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LK30_ACEWD
agcS; cation:amino acid symporter AgcS
Cation:amino acid symporter AgcS {ECO:0000313|EMBL:AFA48784.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Displaying 24 items

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