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L3_133_000G1_scaffold_1712

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_1712_1
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(436..1536)
DNA (1101bp) protein (367aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NP94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14008.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_133_000G1_scaffold_1712_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1582..2217)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FX01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29258.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
lactate utilization protein B/C
L3_133_000G1_scaffold_1712_3
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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2614..4380
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BI23_9FIRM
L3_133_000G1_scaffold_1712_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4737..6299
DNA (1563bp) protein (521aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YYG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62792.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_133_000G1_scaffold_1712_5
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6296..9214
DNA (2919bp) protein (973aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZFP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62789.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_133_000G1_scaffold_1712_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9165..10193
DNA (1029bp) protein (343aa)
SH3 domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9E9_9FIRM
SH3 domain protein {ECO:0000313|EMBL:EET62888.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_133_000G1_scaffold_1712_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10207..11259
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62889.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_133_000G1_scaffold_1712_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11427..12470
DNA (1044bp) protein (348aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EET62890.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EET62890.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9F1_9FIRM
L3_133_000G1_scaffold_1712_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12485..13117
DNA (633bp) protein (211aa)
CAAX amino terminal protease family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9F2_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EET62891.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Predicted metal-dependent membrane protease
L3_133_000G1_scaffold_1712_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13448..18001
DNA (4554bp) protein (1518aa)
Class II glutamine amidotransferase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LE07_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:EET61210.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
glutamate synthase (ferredoxin)
L3_133_000G1_scaffold_1712_11
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18047..19531
DNA (1485bp) protein (495aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LE08_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EET61212.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_133_000G1_scaffold_1712_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19675..21372
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23768.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein DUF1703
L3_133_000G1_scaffold_1712_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21512..22702)
DNA (1191bp) protein (397aa)
Transporter, major facilitator family protein n=3 Tax=Lachnospiraceae RepID=A7B7T4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46172.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
major facilitator superfamily protein
L3_133_000G1_scaffold_1712_14
unknown

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22852..23016
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 14 items

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