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L3_133_000G1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_24_1
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1267)
DNA (1266bp) protein (422aa)
Cell wall/surface repeat protein n=2 Tax=Clostridium cellulovorans RepID=D9STF3_CLOC7
cell wall/surface repeat protein
Cell wall/surface repeat protein {ECO:0000313|EMBL:ADL50769.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_133_000G1_scaffold_24_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(1732..3153)
DNA (1422bp) protein (474aa)
Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
leucyl aminopeptidase (EC:3.4.11.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5C4_9FIRM
L3_133_000G1_scaffold_24_3
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3257..4582)
DNA (1326bp) protein (442aa)
alpha-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=1 Tax=Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 RepID=S6LKP0_VIBNA
Alpha-L-fucosidase {ECO:0000313|EMBL:ESL02843.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
L3_133_000G1_scaffold_24_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4704..7271)
DNA (2568bp) protein (856aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85666.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Transglutaminase-like superfamily.
L3_133_000G1_scaffold_24_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7363..8271)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CX99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71911.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
binding-protein-dependent transport systems inner membrane component
L3_133_000G1_scaffold_24_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8284..9222)
DNA (939bp) protein (313aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BI66_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI71910.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
binding-protein-dependent transport systems inner membrane component
L3_133_000G1_scaffold_24_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9298..11001)
DNA (1704bp) protein (568aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BJA1_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI71908.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
extracellular solute-binding protein
L3_133_000G1_scaffold_24_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11314..13569)
DNA (2256bp) protein (752aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CJB4_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI67416.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
AraC family transcriptional regulator
L3_133_000G1_scaffold_24_9
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13761..14063
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I9C0_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL75380.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L3_133_000G1_scaffold_24_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14089..16098)
DNA (2010bp) protein (670aa)
Glutaredoxin 2 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJE3_CLOPH
glutaredoxin
Glutaredoxin 2 {ECO:0000313|EMBL:ABX42555.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_133_000G1_scaffold_24_11
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16126..17649)
DNA (1524bp) protein (508aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAV7_9FIRM
L3_133_000G1_scaffold_24_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18121..18411
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48307.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_133_000G1_scaffold_24_13
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists


comp(18517..21162)
DNA (2646bp) protein (882aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Valine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BZI7_9FIRM
valyl-tRNA synthetase
L3_133_000G1_scaffold_24_14
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21728..22519
DNA (792bp) protein (264aa)
Ferredoxin n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I7G2_9CLOT
Ferredoxin {ECO:0000313|EMBL:ETA81211.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
4Fe-4S ferredoxin
L3_133_000G1_scaffold_24_15
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23075..26041)
DNA (2967bp) protein (989aa)
Alpha-L-rhamnosidase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZW22_MAHA5
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AEE96402.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_133_000G1_scaffold_24_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26130..27005)
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CFU3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66191.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sugar ABC transporter permease
L3_133_000G1_scaffold_24_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27018..27914)
DNA (897bp) protein (299aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B1Y5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66190.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative binding-protein-dependent transport systems inner membrane component
L3_133_000G1_scaffold_24_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28008..29411)
DNA (1404bp) protein (468aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AK44_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI66189.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative family 1 extracellular solute-binding protein
L3_133_000G1_scaffold_24_19
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(29542..31068)
DNA (1527bp) protein (509aa)
Response regulator n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QW04_9FIRM
Response regulator {ECO:0000313|EMBL:CCZ32980.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Two component transcriptional regulator, AraC family
L3_133_000G1_scaffold_24_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(31061..32821)
DNA (1761bp) protein (587aa)
Putative sensor with HAMP domain n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RE84_9FIRM
Putative sensor with HAMP domain {ECO:0000313|EMBL:CCZ32981.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
integral membrane sensor signal transduction histidine kinase
L3_133_000G1_scaffold_24_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(32975..33892)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RN00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44426.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transcriptional regulator
L3_133_000G1_scaffold_24_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33925..35754)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22375.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Alcohol acetyltransferase.
L3_133_000G1_scaffold_24_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35758..36696)
DNA (939bp) protein (313aa)
arylacetamide deacetylase (EC:3.1.1.-)
Carboxylesterase family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CDE4_9CLOT
Carboxylesterase family protein {ECO:0000313|EMBL:ERI67262.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_133_000G1_scaffold_24_24
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36698..37672)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60964.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_133_000G1_scaffold_24_25
unknown

Not on your lists

37782..37949
DNA (168bp) protein (56aa)

This feature has no annotations

L3_133_000G1_scaffold_24_26
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37957..39024
DNA (1068bp) protein (356aa)
Collagen like triple helix protein n=1 Tax=Bacillus licheniformis 9945A RepID=R9TUQ1_BACLI
collagen like triple helix protein
Collagen like triple helix protein {ECO:0000313|EMBL:AGN35299.1}; TaxID=766760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis 9945A.;"
L3_133_000G1_scaffold_24_27
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(39041..39499)
DNA (459bp) protein (153aa)
low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase low molecular weight n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HEN8_9FIRM
Protein-tyrosine-phosphatase low molecular weight {ECO:0000313|EMBL:CDB36213.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
L3_133_000G1_scaffold_24_28
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39745..41175)
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
HAMP domain protein n=7 Tax=Clostridium difficile RepID=T4QWQ7_CLODI
putative lantibiotic resistance two-component sensor kinase
L3_133_000G1_scaffold_24_29
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41189..41881)
DNA (693bp) protein (231aa)
Response regulator n=1 Tax=Clostridium difficile CD160 RepID=T3DLK1_CLODI
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:CDZ23942.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_133_000G1_scaffold_24_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42015..42779)
DNA (765bp) protein (255aa)
Lantibiotic protection ABC transporter permease subunit, MutG family n=12 Tax=Clostridium difficile RepID=G6B444_CLODI
Lantibiotic protection ABC transporter permease subunit, MutG family {ECO:0000313|EMBL:EHJ31660.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
spaG; lantibiotic ABC transporter permease
Displaying items 1-30 of 147 in total

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