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L3_133_000G1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_35_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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271..852
DNA (582bp) protein (194aa)
Bacterial transferase {ECO:0000313|EMBL:CEO21041.1}; EC=2.3.1.- {ECO:0000313|EMBL:CEO21041.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Maltose O-acetyltransferase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AAT5_CLOBO
maltose O-acetyltransferase
L3_133_000G1_scaffold_35_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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938..1462
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BHN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63763.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_133_000G1_scaffold_35_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1709..2347
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LAB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62521.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_133_000G1_scaffold_35_4
unknown

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2613..2801
DNA (189bp) protein (63aa)

This feature has no annotations

L3_133_000G1_scaffold_35_5
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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2798..3403
DNA (606bp) protein (202aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CET4_9FIRM
L3_133_000G1_scaffold_35_6
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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3416..4177
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BX70_9FIRM
L3_133_000G1_scaffold_35_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4190..4864
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LAB7_9FIRM
L3_133_000G1_scaffold_35_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5097..9353)
DNA (4257bp) protein (1419aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEM4_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EET61007.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase
L3_133_000G1_scaffold_35_9
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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9837..10979
DNA (1143bp) protein (381aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CER8_9FIRM
L3_133_000G1_scaffold_35_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11062..11370
DNA (309bp) protein (103aa)
Preprotein translocase, YajC subunit n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEM6_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EET61009.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
protein translocase subunit yajC
L3_133_000G1_scaffold_35_11
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11554..12987
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNA0_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37595.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_133_000G1_scaffold_35_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13000..15981
DNA (2982bp) protein (994aa)
Diguanylate cyclase (GGDEF) domain protein n=5 Tax=Clostridium difficile RepID=D5Q0Y1_CLODI
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFH16721.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
diguanylate kinase signaling protein
L3_133_000G1_scaffold_35_13
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16073..17155
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEM7_9FIRM
L3_133_000G1_scaffold_35_14
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17269..18939
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEM8_9FIRM
L3_133_000G1_scaffold_35_15
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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18955..20628
DNA (1674bp) protein (558aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BRF8_9FIRM
L3_133_000G1_scaffold_35_16
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20728..21810
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEN1_9FIRM
L3_133_000G1_scaffold_35_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21812..22975
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EET61015.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EET61015.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEN2_9FIRM
L3_133_000G1_scaffold_35_18
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23212..24501
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PVC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13702.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_133_000G1_scaffold_35_19
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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24584..27199
DNA (2616bp) protein (872aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BK01_9FIRM
L3_133_000G1_scaffold_35_20
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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27245..28126
DNA (882bp) protein (294aa)
Transporter small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BRF6_9FIRM
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDA63514.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
mechanosensitive channel protein
L3_133_000G1_scaffold_35_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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28132..28554
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6N7M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC07095.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_133_000G1_scaffold_35_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28600..29343
DNA (744bp) protein (248aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylases SIR2 family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q196_9FIRM
NAD-dependent protein deacetylases SIR2 family {ECO:0000313|EMBL:CDC15762.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_133_000G1_scaffold_35_23
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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29386..30693
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CE46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63512.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_133_000G1_scaffold_35_24
unknown

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30912..31523
DNA (612bp) protein (204aa)

This feature has no annotations

L3_133_000G1_scaffold_35_25
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31777..32274)
DNA (498bp) protein (166aa)
Predicted methylated DNA-protein cysteine methyltransferase n=1 Tax=Coprococcus catus GD/7 RepID=D4JA64_9FIRM
Predicted methylated DNA-protein cysteine methyltransferase
Predicted methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:CBK81235.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_133_000G1_scaffold_35_26
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32500..32790
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54814.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_133_000G1_scaffold_35_27
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33129..33524
DNA (396bp) protein (132aa)
Zn-finger containing protein n=1 Tax=Blautia producta RepID=UPI0003676EE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK80403.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_133_000G1_scaffold_35_28
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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33547..34395
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JUM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67331.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_133_000G1_scaffold_35_29
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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34376..35032
DNA (657bp) protein (219aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Blautia sp. CAG:257 RepID=R5XME6_9FIRM
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CDA05502.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_133_000G1_scaffold_35_30
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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35535..36206
DNA (672bp) protein (224aa)
PhoB family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI0002883740
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=BJP_IG2102_Clostridiales_34_350
Displaying items 1-30 of 162 in total

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