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L3_133_000G1_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_96_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(260..877)
DNA (618bp) protein (206aa)
Polysaccharide deacetylase, PdaB family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFQ7_9FIRM
Polysaccharide deacetylase, PdaB family {ECO:0000313|EMBL:EET60642.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
polysaccharide deacetylase
L3_133_000G1_scaffold_96_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1009..1749)
DNA (741bp) protein (247aa)
ABC-2 type transporter n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL94_CELLD
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_133_000G1_scaffold_96_3
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1746..2468)
DNA (723bp) protein (241aa)
ABC transporter related protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL95_CELLD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADZ85740.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_133_000G1_scaffold_96_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2840..3733
DNA (894bp) protein (298aa)
Sigma-70 region 2 family protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T4M6_9CLOT
Sigma-70 region 2 family protein {ECO:0000313|EMBL:CCZ58124.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
RNA polymerase, sigma subunit, ECF family
L3_133_000G1_scaffold_96_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4087..4851
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34221.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L3_133_000G1_scaffold_96_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5022..5873)
DNA (852bp) protein (284aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAS8_9FIRM
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:CDE36495.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_133_000G1_scaffold_96_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5870..7054)
DNA (1185bp) protein (395aa)
Aspartate oxidase (EC:1.4.3.16)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35392.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_133_000G1_scaffold_96_8
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7073..7981)
DNA (909bp) protein (303aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
Quinolinate synthetase complex, A subunit n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBJ7_9FIRM
quinolinate synthetase A
L3_133_000G1_scaffold_96_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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8124..8504
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DA08_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI93635.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L3_133_000G1_scaffold_96_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8501..9376
DNA (876bp) protein (292aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EL47_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI93636.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
ABC transporter ATP-binding protein
L3_133_000G1_scaffold_96_11
unknown

Not on your lists

9373..10020
DNA (648bp) protein (216aa)

This feature has no annotations

L3_133_000G1_scaffold_96_12
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10142..11092)
DNA (951bp) protein (317aa)
Hypothetical yqkD protein n=1 Tax=Lysinibacillus sphaericus (strain C3-41) RepID=B1HXZ7_LYSSC
hypothetical protein
Hypothetical yqkD protein {ECO:0000313|EMBL:ACA41712.1}; TaxID=444177 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus (strain C3-41).;"
L3_133_000G1_scaffold_96_13
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11089..12234)
DNA (1146bp) protein (382aa)
Sugar transferase n=1 Tax=Blautia sp. CAG:257 RepID=R5WYL1_9FIRM
Sugar transferase {ECO:0000313|EMBL:CDA05114.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
glycosyl transferase
L3_133_000G1_scaffold_96_14
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12313..12657)
DNA (345bp) protein (115aa)
Putative membrane protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KRY7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB76265.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
EamA-like transporter family
L3_133_000G1_scaffold_96_15
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12650..13015)
DNA (366bp) protein (122aa)
Putative membrane protein n=1 Tax=Blautia sp. CAG:237 RepID=R6L288_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB76266.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L3_133_000G1_scaffold_96_16
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13017..14210)
DNA (1194bp) protein (398aa)
carboxylate-amine ligase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B664B9
ATP-grasp domain protein {ECO:0000313|EMBL:EET62177.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
phosphoribosylglycinamide synthetase
L3_133_000G1_scaffold_96_17
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14247..15413)
DNA (1167bp) protein (389aa)
Phosphoribosylglycinamide synthetase family protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NUV2_9FIRM
Phosphoribosylglycinamide synthetase family protein {ECO:0000313|EMBL:CDC12169.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
carbamoyl-phosphate synthase large subunit
L3_133_000G1_scaffold_96_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15573..16697)
DNA (1125bp) protein (375aa)
RNA polymerase sigma factor SigA n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFQ8_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
RNA polymerase, sigma 70 subunit, RpoD
L3_133_000G1_scaffold_96_19
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(16760..17218)
DNA (459bp) protein (153aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BKI1_9FIRM
peptidase A8 signal peptidase II
L3_133_000G1_scaffold_96_20
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(17223..18698)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=2 Tax=root RepID=R6BUU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64774.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_133_000G1_scaffold_96_21
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(18845..20671)
DNA (1827bp) protein (609aa)
Putative serine protease HtrA n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CHL8_9FIRM
Putative serine protease HtrA {ECO:0000313|EMBL:CDA64777.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_133_000G1_scaffold_96_22
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20964..22790)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
glutamine amidotransferase n=1 Tax=Blautia producta RepID=UPI000381796B
L3_133_000G1_scaffold_96_23
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(23021..23959)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369038E
Uncharacterized protein {ECO:0000313|EMBL:CDA64778.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_133_000G1_scaffold_96_24
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(23964..25400)
DNA (1437bp) protein (479aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BUU9_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CDA64779.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_133_000G1_scaffold_96_25
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(25567..26967)
DNA (1401bp) protein (467aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BNL3_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDA64780.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Undecaprenyl-phosphate glucose phosphotransferase
L3_133_000G1_scaffold_96_26
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(27068..28030)
DNA (963bp) protein (321aa)
Predicted glycosyltransferases n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BZZ9_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CDA64781.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Predicted glycosyltransferases
L3_133_000G1_scaffold_96_27
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28077..30059)
DNA (1983bp) protein (661aa)
Glycosyl transferase group 2 family n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R174_9FIRM
Glycosyl transferase group 2 family {ECO:0000313|EMBL:CDC38974.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Glycosyl transferase, group 2 family protein
L3_133_000G1_scaffold_96_28
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30052..31233)
DNA (1182bp) protein (394aa)
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFR5_9FIRM
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase {ECO:0000313|EMBL:EET60650.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TDP-4-keto-6-deoxy-D-glucose transaminase
L3_133_000G1_scaffold_96_29
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31374..34112)
DNA (2739bp) protein (913aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BQX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57898.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
multidrug resistance protein B
L3_133_000G1_scaffold_96_30
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34221..36668)
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C2S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57896.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Predicted glycosyltransferases
Displaying items 1-30 of 104 in total

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