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L3_133_000G1_scaffold_164

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_164_1
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1391)
DNA (1389bp) protein (463aa)
Putative sensor-like histidine kinase {ECO:0000313|EMBL:KJJ73174.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ73174.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDC9_9CLOT
putative membrane protein
L3_133_000G1_scaffold_164_2
Paenibacillus sp. Aloe-11, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1388..4477)
DNA (3090bp) protein (1030aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CJG2_9BACL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHS57602.1}; TaxID=1050222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. Aloe-11.;"
L3_133_000G1_scaffold_164_3
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4593..10067)
DNA (5475bp) protein (1825aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FX63_9CLOT
putative glycosylase
Putative glycosylase {ECO:0000313|EMBL:AKA69367.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_133_000G1_scaffold_164_4
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10181..11515)
DNA (1335bp) protein (445aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B085_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32118.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_133_000G1_scaffold_164_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11547..12371)
DNA (825bp) protein (275aa)
Sugar ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z372_9CLOT
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EGB91504.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000G1_scaffold_164_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12368..13240)
DNA (873bp) protein (291aa)
Multiple sugar-binding transport system permease protein MsmF n=1 Tax=Clostridium sp. D5 RepID=F0Z371_9CLOT
Multiple sugar-binding transport system permease protein MsmF {ECO:0000313|EMBL:EGB91503.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sugar ABC transporter permease
L3_133_000G1_scaffold_164_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13399..14361)
DNA (963bp) protein (321aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z370_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EGB91502.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L3_133_000G1_scaffold_164_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(14315..14800)
DNA (486bp) protein (162aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJ82_9FIRM
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CCZ34846.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_133_000G1_scaffold_164_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15143..16948
DNA (1806bp) protein (602aa)
Putative HAMP domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z378_9CLOT
Putative HAMP domain protein {ECO:0000313|EMBL:EGB91510.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
integral membrane sensor signal transduction histidine kinase
L3_133_000G1_scaffold_164_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16932..18452
DNA (1521bp) protein (507aa)
Two-component response regulator YesN n=1 Tax=Clostridium sp. D5 RepID=F0Z379_9CLOT
Two-component response regulator YesN {ECO:0000313|EMBL:EGB91511.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_133_000G1_scaffold_164_11
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(18799..19950)
DNA (1152bp) protein (384aa)
alcohol dehydrogenase n=1 Tax=Blautia producta RepID=UPI000376A624
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:CDC91510.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Alcohol dehydrogenase, class IV
L3_133_000G1_scaffold_164_12
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20029..20808)
DNA (780bp) protein (260aa)
5-deoxyglucuronate isomerase (EC:5.3.1.-)
myo-inositol catabolism protein IolB n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B430A4
Myo-inositol catabolism protein IolB {ECO:0000313|EMBL:CDC38517.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L3_133_000G1_scaffold_164_13
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20901..21914)
DNA (1014bp) protein (338aa)
Oxidoreductase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1F0_CLOSW
Oxidoreductase {ECO:0000313|EMBL:KEZ87839.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
oxidoreductase domain-containing protein
L3_133_000G1_scaffold_164_14
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21947..22843)
DNA (897bp) protein (299aa)
Inosose dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; EC=4.2.1.44 {ECO:0000256|HAMAP-Rule:MF_01672};; 2-keto-myo-inositol dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
2-keto-myo-inositol dehydratase (EC:4.2.1.44)
Inosose dehydratase n=2 Tax=Anaerostipes RepID=E5VS69_9FIRM
L3_133_000G1_scaffold_164_15
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22991..24919)
DNA (1929bp) protein (643aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
Thiamine pyrophosphate enzyme, central domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MIN1_9FIRM
Thiamine pyrophosphate enzyme, central domain protein {ECO:0000313|EMBL:EDR95811.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_133_000G1_scaffold_164_16
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24935..25951)
DNA (1017bp) protein (339aa)
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
5-dehydro-2-deoxygluconokinase (EC:2.7.1.92)
5-dehydro-2-deoxygluconokinase n=2 Tax=Anaerostipes RepID=E5VQB3_9FIRM
L3_133_000G1_scaffold_164_17
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26290..27318)
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family (Fragment) n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MA38_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDR98879.1}; Flags: Fragment;; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_133_000G1_scaffold_164_18
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27439..29025)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037F004A
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC34220.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_133_000G1_scaffold_164_19
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29083..30819)
DNA (1737bp) protein (579aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
Histidine kinase n=2 Tax=Anaerostipes RepID=E5VS71_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
L3_133_000G1_scaffold_164_20
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31020..32039)
DNA (1020bp) protein (340aa)
Inositol 2-dehydrogenase (EC:1.1.1.18)
myo-inositol 2-dehydrogenase n=1 Tax=Blautia producta RepID=UPI00037A85C4
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDR96887.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_133_000G1_scaffold_164_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32106..33704)
DNA (1599bp) protein (533aa)
Sodium:solute symporter family protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A4Z8_CLOBO
Transporter {ECO:0000313|EMBL:KGN00125.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;"
sodium:solute symporter family protein
L3_133_000G1_scaffold_164_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33909..34814)
DNA (906bp) protein (302aa)
Putative ribose ABC transporter (Ribose-binding protein) n=1 Tax=Clostridium sp. D5 RepID=F0YUV0_9CLOT
Putative ribose ABC transporter (Ribose-binding protein) {ECO:0000313|EMBL:EGB94670.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type sugar transport system, periplasmic component
L3_133_000G1_scaffold_164_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(35110..35955)
DNA (846bp) protein (282aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Blautia producta RepID=UPI0003819694
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CDC91671.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_133_000G1_scaffold_164_24
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36014..37315)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N8I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79624.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Major Facilitator Superfamily.
L3_133_000G1_scaffold_164_25
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37689..38447
DNA (759bp) protein (253aa)
DeoR family bacterial regulatory protein n=1 Tax=Anaerostipes sp. 3_2_56FAA RepID=E5VQD1_9FIRM
DeoR family bacterial regulatory protein {ECO:0000313|EMBL:EFV23909.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
Transcriptional regulators of sugar metabolism
L3_133_000G1_scaffold_164_26
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(38543..41089)
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BWQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63581.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
KxYKxGKxW signal peptide domain protein
L3_133_000G1_scaffold_164_27
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(41443..42615)
DNA (1173bp) protein (391aa)
Chaperone protein DnaJ n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BK61_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
chaperone protein DnaJ
L3_133_000G1_scaffold_164_28
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(42741..44600)
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BRL4_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
chaperone protein DnaK
L3_133_000G1_scaffold_164_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44687..45355)
DNA (669bp) protein (223aa)
Protein GrpE n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK72_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Molecular chaperone GrpE (heat shock protein)
L3_133_000G1_scaffold_164_30
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(45373..46404)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CEB0_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
heat-inducible transcription repressor HrcA
Displaying items 1-30 of 82 in total

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