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L3_133_000G1_scaffold_246

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_246_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

354..851
DNA (498bp) protein (166aa)
Putative transcriptional regulator protein n=1 Tax=Clostridium sp. D5 RepID=F0YWY1_9CLOT
Putative transcriptional regulator protein {ECO:0000313|EMBL:EGB93469.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator
L3_133_000G1_scaffold_246_2
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

838..1011
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQK1_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO39293.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_133_000G1_scaffold_246_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1077..2318
DNA (1242bp) protein (414aa)
Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YWX9_9CLOT
Efflux ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB93467.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L3_133_000G1_scaffold_246_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2269..2838
DNA (570bp) protein (190aa)
Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YWX9_9CLOT
Efflux ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB93467.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L3_133_000G1_scaffold_246_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2831..4672
DNA (1842bp) protein (614aa)
Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YWX8_9CLOT
Efflux ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB93466.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L3_133_000G1_scaffold_246_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4704..5921
DNA (1218bp) protein (406aa)
Glycosyltransferase (EC:2.4.1.157)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33510.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_133_000G1_scaffold_246_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5908..6564
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33509.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_133_000G1_scaffold_246_8
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6584..7939)
DNA (1356bp) protein (452aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R599_CLOSW
Peptidase S11 {ECO:0000313|EMBL:KEZ91435.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_133_000G1_scaffold_246_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8098..8841)
DNA (744bp) protein (248aa)
ABC transporter family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D5K6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQF23124.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
glycine/betaine ABC transporter ATP-binding protein
L3_133_000G1_scaffold_246_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8856..10394)
DNA (1539bp) protein (513aa)
Substrate binding domain of ABC-type glycine betaine transport system family protein n=5 Tax=Clostridium difficile RepID=T4Q3Y9_CLODI
osmoprotectant ABC transporter substrate-binding/permease
Putative osmoprotectant ABC transporter, substrate-binding/permease protein {ECO:0000313|EMBL:CBE06872.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_133_000G1_scaffold_246_11
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10951..11526
DNA (576bp) protein (192aa)
UPI0002F4FA76 related cluster n=1 Tax=unknown RepID=UPI0002F4FA76
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFP61012.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
transcriptional regulator TetR
L3_133_000G1_scaffold_246_12
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11523..12245
DNA (723bp) protein (241aa)
UPI0002DB7D8D related cluster n=1 Tax=unknown RepID=UPI0002DB7D8D
Uncharacterized protein {ECO:0000313|EMBL:EFP61013.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
hypothetical protein
L3_133_000G1_scaffold_246_13
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12473..13156
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFV3_9CLOT
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EMS69592.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_133_000G1_scaffold_246_14
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13153..14547
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D3713D
integral membrane sensor signal transduction histidine kinase
L3_133_000G1_scaffold_246_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14647..15759
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38661.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_133_000G1_scaffold_246_16
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15940..16995)
DNA (1056bp) protein (352aa)
alcohol dehydrogenase (EC:1.1.1.2)
NADP-dependent alcohol dehydrogenase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E6G7_9FIRM
NADP-dependent alcohol dehydrogenase {ECO:0000313|EMBL:ERI89872.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L3_133_000G1_scaffold_246_17
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17297..17998)
DNA (702bp) protein (234aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D0M4_9FIRM
L3_133_000G1_scaffold_246_18
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18012..18743)
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T2U1_SYNGF
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADY57578.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_133_000G1_scaffold_246_19
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19106..19675
DNA (570bp) protein (190aa)
Regulatory protein TetR n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJQ6_CELLD
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADZ82098.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_133_000G1_scaffold_246_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19804..20493
DNA (690bp) protein (230aa)
Haloacid dehalogenase-like hydrolase n=2 Tax=Clostridiales RepID=B0NEG6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34089.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
HAD-superfamily hydrolase
L3_133_000G1_scaffold_246_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20579..21442
DNA (864bp) protein (288aa)
SIS domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG5_CLOSV
SIS domain protein {ECO:0000313|EMBL:EDS07183.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
RpiR family transcriptional regulator
L3_133_000G1_scaffold_246_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21439..22368
DNA (930bp) protein (310aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG4_CLOSV
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDS07182.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
metallo-beta-lactamase superfamily protein
L3_133_000G1_scaffold_246_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22413..24047
DNA (1635bp) protein (545aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Clostridiales RepID=B0NEG3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34086.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
family 5 extracellular solute-binding protein
L3_133_000G1_scaffold_246_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24070..25011
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34085.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
permease of oligopeptide ABC transporter
L3_133_000G1_scaffold_246_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25021..25836
DNA (816bp) protein (272aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NEG1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34084.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_133_000G1_scaffold_246_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25929..26933
DNA (1005bp) protein (335aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG0_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS07178.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein
L3_133_000G1_scaffold_246_27
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27071..27538
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FAG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47391.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L3_133_000G1_scaffold_246_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27570..28574
DNA (1005bp) protein (335aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEF9_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS07177.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
peptide ABC transporter ATPase
L3_133_000G1_scaffold_246_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28632..29435
DNA (804bp) protein (268aa)
Putative phosphoesterase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEF8_CLOSV
Putative phosphoesterase {ECO:0000313|EMBL:EDS07176.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
calcineurin-like phosphoesterase
L3_133_000G1_scaffold_246_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29563..30501)
DNA (939bp) protein (313aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ80_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL12670.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 72 in total

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