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L3_133_000G1_scaffold_785

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_785_1
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(171..1793)
DNA (1623bp) protein (541aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KIA0_9FIRM
L3_133_000G1_scaffold_785_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(1825..2082)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RI07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32587.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Phosphotransferase System HPr (HPr) Family
L3_133_000G1_scaffold_785_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

2621..3115
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M8S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94925.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_133_000G1_scaffold_785_4
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3451..4734)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F3F4_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99771.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
neutral/alkaline non-lysosomal ceramidase family protein
L3_133_000G1_scaffold_785_5
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4947..5543)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2APT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ31297.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
uracil-DNA glycosylase
L3_133_000G1_scaffold_785_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5552..6463)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46391.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
transcriptional regulator
L3_133_000G1_scaffold_785_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6631..7773)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WZA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92857.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_133_000G1_scaffold_785_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7932..8978)
DNA (1047bp) protein (349aa)
Alcohol dehydrogenase n=2 Tax=Clostridium bolteae RepID=N9ZHI7_9CLOT
Alcohol dehydrogenase {ECO:0000313|EMBL:ENZ46856.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
alcohol dehydrogenase GroES domain-containing protein
L3_133_000G1_scaffold_785_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9435..10445)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RQT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16524.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
LacI family transcriptional regulator
L3_133_000G1_scaffold_785_10
unknown

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comp(10417..10632)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_133_000G1_scaffold_785_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10718..11587)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJJ6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93316.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
bltR; transcriptional regulator
L3_133_000G1_scaffold_785_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11728..13464
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3R0_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:KIE46648.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transport system ATP-binding and permease protein
L3_133_000G1_scaffold_785_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13461..15302
DNA (1842bp) protein (614aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YM54_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:KIE46818.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transport system ATP-binding and permease protein
L3_133_000G1_scaffold_785_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15523..16230)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AWD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70154.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_133_000G1_scaffold_785_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16397..18742)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48186.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
lipoprotein
L3_133_000G1_scaffold_785_16
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18881..21676)
DNA (2796bp) protein (932aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LE29_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS56636.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
L3_133_000G1_scaffold_785_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22011..22574
DNA (564bp) protein (188aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPB8_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG95553.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
AraC family transcriptional regulator
L3_133_000G1_scaffold_785_18
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22526..22882
DNA (357bp) protein (119aa)
Transcriptional regulator with cupin sensor, AraC family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNR2_CELLD
AraC family transcriptional regulator
Transcriptional regulator with cupin sensor, AraC family {ECO:0000313|EMBL:ADZ82410.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_133_000G1_scaffold_785_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23104..24897)
DNA (1794bp) protein (598aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YTU7_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB94317.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter ATP-binding protein/permease
L3_133_000G1_scaffold_785_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24894..26633)
DNA (1740bp) protein (580aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJJ71197.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJJ71197.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XR21_9CLOT
multidrug ABC transporter ATP-binding protein
L3_133_000G1_scaffold_785_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26945..27895
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97122.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_785_22
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28040..34642)
DNA (6603bp) protein (2201aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LKL3_PHOPR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG22133.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum (Photobacterium sp. (strain SS9)).;"
L3_133_000G1_scaffold_785_23
Paenibacillus sp. E194, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34780..41631)
DNA (6852bp) protein (2284aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9U6Y3_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:KJB87514.1}; TaxID=1458845 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. E194.;"
hypothetical protein
L3_133_000G1_scaffold_785_24
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41646..42473)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RXA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62606.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000G1_scaffold_785_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42473..43345)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJN0_9CLOT
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJJ73336.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000G1_scaffold_785_26
unknown

Not on your lists

comp(43326..43436)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 26 items

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