ggKbase home page

L3_133_000G1_scaffold_2299

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_2299_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003822274
Uncharacterized protein {ECO:0000313|EMBL:ENZ10002.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Cna protein B-type domain.
L3_133_000G1_scaffold_2299_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(548..3049)
DNA (2502bp) protein (834aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35254.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_133_000G1_scaffold_2299_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3577..5511)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W860_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99190.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_2299_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5508..7013)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XUG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99191.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
two component system response regulator
L3_133_000G1_scaffold_2299_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6985..8751)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XHQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99192.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
integral membrane sensor signal transduction histidine kinase
L3_133_000G1_scaffold_2299_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8950..9771)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XTG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99193.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000G1_scaffold_2299_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9771..10661)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W8N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99194.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC-type sugar transport systems, permease components
L3_133_000G1_scaffold_2299_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10714..12087)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W865_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99195.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC-type sugar transport system, periplasmic component
L3_133_000G1_scaffold_2299_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12190..13743)
DNA (1554bp) protein (518aa)
glucan endo-1,3-beta-D-glucosidase (EC:3.2.1.39)
Glucan endo-1,3-beta-D-glucosidase {ECO:0000313|EMBL:ADZ85657.1}; EC=3.2.1.39 {ECO:0000313|EMBL:ADZ85657.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKE2_CELLD
L3_133_000G1_scaffold_2299_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14400..14687
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IC93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61011.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
amino acid permease
L3_133_000G1_scaffold_2299_11
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14741..15580)
DNA (840bp) protein (280aa)
NUDIX hydrolase n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L472_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CCY73955.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
NUDIX hydrolase
L3_133_000G1_scaffold_2299_12
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(15686..16378)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BGN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63433.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
putative effector of murein hydrolase
L3_133_000G1_scaffold_2299_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16359..16739)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80984.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
putative effector of murein hydrolase LrgA
L3_133_000G1_scaffold_2299_14
unknown

Not on your lists

comp(16821..17018)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_133_000G1_scaffold_2299_15
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17018..17470)
DNA (453bp) protein (151aa)
UPF0178 protein CA_C2825 n=3 Tax=Clostridium acetobutylicum RepID=Y2825_CLOAB
hypothetical protein
UPF0178 protein CA_C2825; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
Displaying 15 items

View Taxonomy