ggKbase home page

L3_133_000G1_scaffold_3379

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_3379_1
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

287..1222
DNA (936bp) protein (312aa)
Radical SAM protein TIGR01212 family n=1 Tax=Roseburia sp. CAG:471 RepID=R7EG55_9FIRM
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CDE01233.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
radical SAM protein, TIGR01212 family
L3_133_000G1_scaffold_3379_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

1236..1748
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BWZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63696.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_133_000G1_scaffold_3379_3
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1762..2469
DNA (708bp) protein (236aa)
chemotaxis protein CheY n=1 Tax=Paenibacillus elgii RepID=UPI000248C013
regulatory protein vanR
Regulatory protein vanR {ECO:0000313|EMBL:AHF10093.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_133_000G1_scaffold_3379_4
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2462..3388
DNA (927bp) protein (309aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
histidine kinase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E45133
histidine kinase
L3_133_000G1_scaffold_3379_5
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3585..4253
DNA (669bp) protein (223aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=Dehalobacter RepID=K4KU24_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQB22819.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
L3_133_000G1_scaffold_3379_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4258..6852
DNA (2595bp) protein (865aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36743.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_133_000G1_scaffold_3379_7
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6868..9351)
DNA (2484bp) protein (828aa)
Efflux ABC transporter, permease protein n=2 Tax=Firmicutes RepID=A8SNN5_9FIRM
ABC transporter permease {ECO:0000313|EMBL:ETT44040.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
ABC-type transport system, permease
L3_133_000G1_scaffold_3379_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(9348..10022)
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=2 Tax=Firmicutes RepID=A8SNN4_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY39576.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC transporter ATP-binding protein
L3_133_000G1_scaffold_3379_9
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10085..11254)
DNA (1170bp) protein (390aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
HAMP domain protein n=2 Tax=Clostridium difficile RepID=T4RVZ8_CLODI
two-component sensor histidine kinase
L3_133_000G1_scaffold_3379_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11242..11916)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQR4_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA81658.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
two-component response regulator
Displaying 10 items

View Taxonomy