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L3_133_000G1_scaffold_2

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Displaying items 1-30 of 662 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_2_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..415
DNA (414bp) protein (138aa)
Acetyltransferase, GNAT family protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TJI5_LACRL
rimL; GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AGP74219.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

795..1691
DNA (897bp) protein (299aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Glycine--tRNA ligase alpha subunit n=12 Tax=Lactobacillus rhamnosus RepID=B5QNG8_LACRH
glyQ; glycyl-tRNA synthetase subunit alpha
L3_133_000G1_scaffold_2_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1693..3762
DNA (2070bp) protein (690aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Glycine--tRNA ligase beta subunit n=4 Tax=Lactobacillus rhamnosus RepID=C7TJI3_LACRL
glyS; glycine--tRNA ligase subunit beta
L3_133_000G1_scaffold_2_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3948..5717
DNA (1770bp) protein (590aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
DNA primase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJI2_LACRL
dnaG; DNA primase
L3_133_000G1_scaffold_2_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5731..6981
DNA (1251bp) protein (417aa)
RNA polymerase sigma factor SigA n=3 Tax=Lactobacillus rhamnosus RepID=G7V0V7_LACRH
sigA; RNA polymerase sigma factor rpoD
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_133_000G1_scaffold_2_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7170..7880
DNA (711bp) protein (237aa)
SAM-dependent methyltransferase n=4 Tax=Lactobacillus rhamnosus RepID=C7TJI0_LACRL
SAM-dependent methyltransferase
Putative tRNA-m1A22 methylase {ECO:0000313|EMBL:AGP74214.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7867..8661
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Putative GTP cyclohydrolase 1 type 2 n=6 Tax=Lactobacillus rhamnosus RepID=C7TJH9_LACRL
hypothetical protein
L3_133_000G1_scaffold_2_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9037..10749
DNA (1713bp) protein (571aa)
ABC transporter, ATPase component n=5 Tax=Lactobacillus rhamnosus RepID=C7TJH8_LACRL
ABC-type bacteriocin/lantibiotic exporter {ECO:0000313|EMBL:AGP74212.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
ABC transporter
L3_133_000G1_scaffold_2_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10733..12238
DNA (1506bp) protein (502aa)
ABC transporter, ATPase component n=3 Tax=Lactobacillus rhamnosus RepID=C7TJH7_LACRL
ABC transporter ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN80259.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_133_000G1_scaffold_2_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12794..12985
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase family enzyme {ECO:0000313|EMBL:EEN80257.1}; EC=5.3.2.- {ECO:0000313|EMBL:EEN80257.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
4-oxalocrotonate tautomerase, Xylose transport system permease protein xylH n=7 Tax=Lactobacillus rhamnosus RepID=S4ZWB7_LACRH
ywhB; putative tautomerase ywhB
L3_133_000G1_scaffold_2_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13019..13369
DNA (351bp) protein (117aa)
Metal-sulfur cluster biosynthetic enzyme n=4 Tax=Lactobacillus rhamnosus RepID=C7TJH5_LACRL
hypothetical protein
Metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:AGP74207.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13485..14228
DNA (744bp) protein (248aa)
SAM-dependent methyltransferase n=8 Tax=Lactobacillus rhamnosus RepID=C7TJH4_LACRL
SAM-dependent methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AGP74206.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14431..15387
DNA (957bp) protein (319aa)
Conserved membrane protein n=6 Tax=Lactobacillus RepID=C7TJH2_LACRL
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74204.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15374..16705
DNA (1332bp) protein (444aa)
tRNA and rRNA cytosine-C5-methylases n=5 Tax=Lactobacillus rhamnosus RepID=C7TJH1_LACRL
Sun2; tRNA and rRNA cytosine-C5-methylases
RNA methyltransferase {ECO:0000313|EMBL:KIC98023.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_133_000G1_scaffold_2_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16812..17846)
DNA (1035bp) protein (345aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Isopentenyl-diphosphate delta-isomerase n=3 Tax=Lactobacillus rhamnosus RepID=G7V0G1_LACRH
fni; isopentenyl-diphosphate delta-isomerase
L3_133_000G1_scaffold_2_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17812..18816)
DNA (1005bp) protein (335aa)
Diphosphomevalonate decarboxylase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJG9_LACRL
mvaD; diphosphomevalonate decarboxylase
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:AGP74201.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18824..19759)
DNA (936bp) protein (312aa)
Mevalonate kinase n=4 Tax=Lactobacillus rhamnosus RepID=C7TJG8_LACRL
mvaK; mevalonate kinase
Mevalonate kinase {ECO:0000313|EMBL:AGP74200.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20301..23840
DNA (3540bp) protein (1180aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01453, ECO:0000256|SAAS:SAAS00044212}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01453, ECO:0000256|SAAS:SAAS00044217};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01453, ECO:0000256|SAAS:SAAS00044220};; ATP-dependent helicase/nuclease RexB {ECO:0000256|HAMAP-Rule:MF_01453}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus rhamnosus RepID=S5A3S8_LACRH
PD-(D/E)XK nuclease superfamily protein
L3_133_000G1_scaffold_2_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23837..27547
DNA (3711bp) protein (1237aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; ATP-dependent helicase/nuclease subunit A; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
ATP-dependent helicase/nuclease subunit A n=5 Tax=Lactobacillus rhamnosus RepID=C7TJG6_LACRL
addA; helicase-exonuclease AddAB, AddA subunit
L3_133_000G1_scaffold_2_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27591..30392
DNA (2802bp) protein (934aa)
DNA polymerase III, Rad3-related DNA helicase n=4 Tax=Lactobacillus rhamnosus RepID=C7TJG5_LACRL
Putative DnaQ family exonuclease/DinG family helicase {ECO:0000313|EMBL:EEN80337.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
exonuclease, DNA polymerase III, epsilon subunit family domain protein
L3_133_000G1_scaffold_2_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30794..31285
DNA (492bp) protein (164aa)
Conserved extracellular protein n=10 Tax=Lactobacillus rhamnosus RepID=C7TJG3_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74194.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31338..32513
DNA (1176bp) protein (392aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEN80334.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEN80334.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Aspartate/tyrosine/aromatic aminotransferase n=6 Tax=Lactobacillus rhamnosus RepID=B5QNJ8_LACRH
aspartate aminotransferase
L3_133_000G1_scaffold_2_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32537..33835
DNA (1299bp) protein (433aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparagine--tRNA ligase; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Asparagine--tRNA ligase n=6 Tax=Lactobacillus rhamnosus RepID=C7TJG1_LACRL
asnC; asparaginyl-tRNA synthetase
L3_133_000G1_scaffold_2_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33890..34510
DNA (621bp) protein (207aa)
DNA replication protein DnaD n=5 Tax=Lactobacillus rhamnosus RepID=C7TJG0_LACRL
dnaD domain protein
Chromosome replication initiation protein dnaD {ECO:0000313|EMBL:AGP74191.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34565..35215
DNA (651bp) protein (217aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Endonuclease III n=5 Tax=Lactobacillus rhamnosus RepID=C7TJF9_LACRL
nth; endonuclease III
L3_133_000G1_scaffold_2_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35164..35676
DNA (513bp) protein (171aa)
Putative ComE operon protein 2 n=2 Tax=Lactobacillus rhamnosus RepID=C2JXA7_LACRH
Putative ComE operon protein 2 {ECO:0000313|EMBL:EEN80330.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
comEB; putative deoxycytidylate deaminase
L3_133_000G1_scaffold_2_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35795..38104)
DNA (2310bp) protein (770aa)
Penicillin-binding protein 1A n=2 Tax=Lactobacillus rhamnosus RepID=C7TJF7_LACRL
Penicillin-binding protein {ECO:0000313|EMBL:KIC98067.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
pbp1A; penicillin-binding protein 1A
L3_133_000G1_scaffold_2_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38097..38723)
DNA (627bp) protein (209aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Holliday junction resolvase RecU n=6 Tax=Lactobacillus rhamnosus RepID=C7TJF6_LACRL
recU; Holliday junction-specific endonuclease
L3_133_000G1_scaffold_2_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38790..39365
DNA (576bp) protein (192aa)
UPF0398 protein LC705_01500 n=6 Tax=Lactobacillus rhamnosus RepID=C7TJF5_LACRL
hypothetical protein
UPF0398 protein LOCK908_1547 {ECO:0000256|HAMAP-Rule:MF_01575}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_133_000G1_scaffold_2_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

39421..39819
DNA (399bp) protein (133aa)
Cell cycle protein GpsB n=10 Tax=Lactobacillus rhamnosus RepID=B5QNJ0_LACRH
gpsB; cell division protein GpsB
Cell cycle protein GpsB {ECO:0000256|HAMAP-Rule:MF_02011}; Guiding PBP1-shuttling protein {ECO:0000256|HAMAP-Rule:MF_02011}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 662 in total

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