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L3_133_000G1_scaffold_1902

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_1902_1
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(534..1652)
DNA (1119bp) protein (373aa)
UPI0003D6329D related cluster n=1 Tax=unknown RepID=UPI0003D6329D
Nicotinate-nucleotide-dimethylbenzimidazolephosp horibosyltransferase {ECO:0000313|EMBL:ETI98876.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_133_000G1_scaffold_1902_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1649..2686)
DNA (1038bp) protein (346aa)
UPI0003D6056A related cluster n=1 Tax=unknown RepID=UPI0003D6056A
Nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase {ECO:0000313|EMBL:ETI98877.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_133_000G1_scaffold_1902_3
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2810..3697)
DNA (888bp) protein (296aa)
cyclohexadienyl dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=2 Tax=Veillonella sp. 6_1_27 RepID=D6KQP2_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:EFG25090.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L3_133_000G1_scaffold_1902_4
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3805..5151)
DNA (1347bp) protein (449aa)
Probable transporter YisQ n=2 Tax=Veillonella sp. 6_1_27 RepID=D6KQP1_9FIRM
Probable transporter YisQ {ECO:0000313|EMBL:EFG25089.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
MATE efflux family protein
L3_133_000G1_scaffold_1902_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5357..6229)
DNA (873bp) protein (291aa)
Pyruvate ferredoxin oxidoreductase, beta subunit n=2 Tax=Veillonella RepID=D6KK74_9FIRM
Pyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EFG25088.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
L3_133_000G1_scaffold_1902_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6231..7982)
DNA (1752bp) protein (584aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=4 Tax=Veillonella RepID=D1BP30_VEIPT
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EGL77137.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
L3_133_000G1_scaffold_1902_7
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8279..9064)
DNA (786bp) protein (262aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
tRNA pseudouridine synthase A n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQN8_9FIRM
tRNA pseudouridine synthase A
L3_133_000G1_scaffold_1902_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9061..9864)
DNA (804bp) protein (268aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ89_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
cobalt transporter
L3_133_000G1_scaffold_1902_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9854..10714)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
ATPase component of general energizing module of ECF transporter n=3 Tax=Veillonella parvula RepID=T0U5X6_9FIRM
ABC transporter
L3_133_000G1_scaffold_1902_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10714..11622)
DNA (909bp) protein (303aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ATPase component of general energizing module of ECF transporter n=3 Tax=Veillonella parvula RepID=T0SV16_9FIRM
cobalt ABC transporter ATPase
L3_133_000G1_scaffold_1902_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11907..12242)
DNA (336bp) protein (112aa)
50S ribosomal protein L17 n=9 Tax=Veillonella RepID=D1BP35_VEIPT
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_133_000G1_scaffold_1902_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12255..13259)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
DNA-directed RNA polymerase subunit alpha n=3 Tax=Veillonella parvula RepID=T0T2G0_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_133_000G1_scaffold_1902_13
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13330..13719)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=13 Tax=Veillonella RepID=D1BP37_VEIPT
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_133_000G1_scaffold_1902_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13739..14107)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=7 Tax=Veillonella RepID=D1BP38_VEIPT
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
L3_133_000G1_scaffold_1902_15
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14131..14244)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=13 Tax=Veillonella RepID=D1BP39_VEIPT
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L3_133_000G1_scaffold_1902_16
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14271..14489)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=8 Tax=Veillonella RepID=D1BP40_VEIPT
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_133_000G1_scaffold_1902_17
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14512..15282)
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Methionine aminopeptidase n=6 Tax=Veillonella RepID=D1BP41_VEIPT
methionine aminopeptidase
L3_133_000G1_scaffold_1902_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15286..15849)
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Adenylate kinase n=11 Tax=Veillonella RepID=D1BP42_VEIPT
adenylate kinase
L3_133_000G1_scaffold_1902_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15862..17124)
DNA (1263bp) protein (421aa)
Protein translocase subunit SecY n=2 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP43_VEIPT
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_133_000G1_scaffold_1902_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17126..17572)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=5 Tax=Veillonella RepID=D1BP44_VEIPT
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_133_000G1_scaffold_1902_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17595..17774)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=8 Tax=Veillonella RepID=D1BP45_VEIPT
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_1902_22
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17789..18292)
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=8 Tax=Veillonella RepID=D1BP46_VEIPT
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_133_000G1_scaffold_1902_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18311..18691)
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE2_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
50S ribosomal protein L18
L3_133_000G1_scaffold_1902_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18709..19254)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=7 Tax=Veillonella RepID=D1BP48_VEIPT
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_1902_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19279..19665)
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=7 Tax=Veillonella RepID=D1BP49_VEIPT
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L3_133_000G1_scaffold_1902_26
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19693..19962)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=7 Tax=Veillonella RepID=D1BP50_VEIPT
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_133_000G1_scaffold_1902_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19979..20518)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=6 Tax=Veillonella RepID=D1BP51_VEIPT
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_1902_28
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20542..20862)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=11 Tax=Veillonella RepID=D1BP52_VEIPT
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
L3_133_000G1_scaffold_1902_29
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20881..21168)
DNA (288bp) protein (96aa)
50S ribosomal protein L14 n=9 Tax=Veillonella RepID=D1BP53_VEIPT
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Displaying 29 items

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