ggKbase home page

L3_133_000G1_scaffold_778

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_778_1
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
Inner-membrane translocator n=4 Tax=Veillonella RepID=D1BQI2_VEIPT
inner-membrane translocator
Ribose ABC transporter, permease protein {ECO:0000313|EMBL:EFG22462.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L3_133_000G1_scaffold_778_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(146..1627)
DNA (1482bp) protein (494aa)
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T9F6_9FIRM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ23796.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_778_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1672..2085)
DNA (414bp) protein (138aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
D-ribose pyranase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0TA65_9FIRM
transporter
L3_133_000G1_scaffold_778_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2104..2994)
DNA (891bp) protein (297aa)
Ribokinase {ECO:0000313|EMBL:EGL77372.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EGL77372.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribokinase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L0A5_9FIRM
ribokinase
L3_133_000G1_scaffold_778_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3335..3661)
DNA (327bp) protein (109aa)
Plasmid stabilization system protein, RelE/ParE family n=2 Tax=Veillonella RepID=D1YNV9_9FIRM
Plasmid stabilization system protein, RelE/ParE family {ECO:0000313|EMBL:ETJ02204.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_133_000G1_scaffold_778_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3666..3947)
DNA (282bp) protein (94aa)
Prevent-host-death family protein n=4 Tax=Veillonella RepID=T0T2R6_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EFB86514.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
prevent-host-death family protein
L3_133_000G1_scaffold_778_7
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4185..4841)
DNA (657bp) protein (219aa)
NAD-dependent epimerase/dehydratase n=7 Tax=Veillonella RepID=D1BQI7_VEIPT
NAD-dependent epimerase/dehydratase
Oxidoreductase {ECO:0000313|EMBL:EFG22468.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L3_133_000G1_scaffold_778_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4949..5470)
DNA (522bp) protein (174aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFB86512.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFB86512.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Isochorismatase family protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YNV6_9FIRM
isochorismatase hydrolase
L3_133_000G1_scaffold_778_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5686..5931
DNA (246bp) protein (82aa)
Prevent-host-death family protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQI9_VEIPT
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ACZ23802.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_778_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6283..8043
DNA (1761bp) protein (587aa)
N-6 DNA methylase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQJ0_VEIPT
N-6 DNA methylase {ECO:0000313|EMBL:ACZ23803.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
N-6 DNA methylase
L3_133_000G1_scaffold_778_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8037..8567
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQJ1_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ23804.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_778_12
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8719..10569
DNA (1851bp) protein (617aa)
Putative modification enzyme transmembrane protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KRV0_9FIRM
Putative modification enzyme transmembrane protein {ECO:0000313|EMBL:EFG24546.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
N-6 DNA methylase
L3_133_000G1_scaffold_778_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10566..11750
DNA (1185bp) protein (395aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQJ3_VEIPT
restriction modification system DNA specificity domain-containing protein
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:ACZ23806.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_778_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11764..14928
DNA (3165bp) protein (1055aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQJ4_VEIPT
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ACZ23807.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
HsdR family type I site-specific deoxyribonuclease
L3_133_000G1_scaffold_778_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15155..16780
DNA (1626bp) protein (542aa)
ABC transporter related protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQJ5_VEIPT
ABC transporter related protein {ECO:0000313|EMBL:ACZ23808.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
ABC transporter
L3_133_000G1_scaffold_778_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16773..17585
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YNV3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB86509.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
ABC transporter
L3_133_000G1_scaffold_778_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17595..18263
DNA (669bp) protein (223aa)
Cobalt transport protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L098_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EGL77480.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
cobalt transporter
L3_133_000G1_scaffold_778_18
unknown

Not on your lists

18513..18860
DNA (348bp) protein (116aa)

This feature has no annotations

L3_133_000G1_scaffold_778_19
unknown

Not on your lists

comp(18914..19255)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_133_000G1_scaffold_778_20
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19276..19728)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D2S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78854.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L3_133_000G1_scaffold_778_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19961..20461
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQJ8_VEIPT
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACZ23811.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_778_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20562..21425
DNA (864bp) protein (288aa)
Histidinol phosphate phosphatase HisJ family n=4 Tax=Veillonella parvula RepID=D1BQJ9_VEIPT
HisJ family histidinol phosphate phosphatase
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:ACZ23812.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_133_000G1_scaffold_778_23
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21612..23273
DNA (1662bp) protein (554aa)
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00008790}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
ATP phosphoribosyltransferase n=3 Tax=Veillonella RepID=D6KKN4_9FIRM
ATP phosphoribosyltransferase
L3_133_000G1_scaffold_778_24
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23346..24623
DNA (1278bp) protein (426aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Histidinol dehydrogenase n=2 Tax=Veillonella RepID=D6KKN5_9FIRM
histidinol dehydrogenase
L3_133_000G1_scaffold_778_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24746..25336
DNA (591bp) protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L092_9FIRM
imidazoleglycerol-phosphate dehydratase
L3_133_000G1_scaffold_778_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25350..26072
DNA (723bp) protein (241aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UCR6_9FIRM
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
L3_133_000G1_scaffold_778_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26157..26915
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D5D6B5 related cluster n=1 Tax=unknown RepID=UPI0003D5D6B5
Imidazole glycerol phosphate synthase cyclase subunit
L3_133_000G1_scaffold_778_28
Veillonella sp. DORA_B_18_19_23, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27077..27394
DNA (318bp) protein (106aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1403933 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_B_18_19_23.;"
Phosphoribosyl-AMP cyclohydrolase n=3 Tax=Veillonella RepID=D1YNU4_9FIRM
phosphoribosyl-AMP cyclohydrolase
L3_133_000G1_scaffold_778_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27397..27723
DNA (327bp) protein (109aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YNU3_9FIRM
phosphoribosyl-ATP diphosphatase
L3_133_000G1_scaffold_778_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27833..28909
DNA (1077bp) protein (359aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Histidinol-phosphate aminotransferase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YNU2_9FIRM
histidinol-phosphate aminotransferase
Displaying items 1-30 of 46 in total

View Taxonomy