ggKbase home page

L3_133_000G1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 266 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000G1_scaffold_3_1
unknown

Not on your lists

459..686
DNA (228bp) protein (76aa)

This feature has no annotations

L3_133_000G1_scaffold_3_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(829..1248)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ATY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC94719.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_133_000G1_scaffold_3_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1338..2306)
DNA (969bp) protein (323aa)
Carboxypeptidase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPB3_9CLOT
Carboxypeptidase {ECO:0000313|EMBL:ENY92535.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_133_000G1_scaffold_3_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2317..2712)
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPX7_9CLOT
L3_133_000G1_scaffold_3_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2727..3857)
DNA (1131bp) protein (377aa)
Rod shape determining protein RodA n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9E7_9CLOT
Rod shape determining protein RodA {ECO:0000313|EMBL:ENY92533.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
cell cycle protein
L3_133_000G1_scaffold_3_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3860..4138)
DNA (279bp) protein (93aa)
Cell division topological specificity factor n=3 Tax=Clostridium RepID=D3AL17_9CLOT
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cell division topological specificity factor MinE
L3_133_000G1_scaffold_3_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4149..4940)
DNA (792bp) protein (264aa)
Site-determining protein n=2 Tax=Clostridium hathewayi RepID=N9XA11_9CLOT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
septum site-determining protein MinD
L3_133_000G1_scaffold_3_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4974..5639)
DNA (666bp) protein (222aa)
Probable septum site-determining protein MinC n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPA8_9CLOT
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
septum formation inhibitor MinC
L3_133_000G1_scaffold_3_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5671..8535)
DNA (2865bp) protein (955aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92529.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
penicillin-binding protein transpeptidase
L3_133_000G1_scaffold_3_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8528..9046)
DNA (519bp) protein (173aa)
Rod shape-determining protein MreD n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9E1_9CLOT
Rod shape-determining protein MreD {ECO:0000313|EMBL:ENY92528.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
rod shape-determining protein MreD
L3_133_000G1_scaffold_3_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9092..10039)
DNA (948bp) protein (316aa)
Cell shape-determining protein MreC n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WYE0_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
rod shape-determining protein MreC
L3_133_000G1_scaffold_3_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10040..10735)
DNA (696bp) protein (232aa)
DNA repair protein RadC n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XA05_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:ENY92526.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
DNA repair protein RadC
L3_133_000G1_scaffold_3_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10784..11035)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92525.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_3_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11138..12418)
DNA (1281bp) protein (427aa)
Aluminum resistance protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPW5_9CLOT
Aluminum resistance protein {ECO:0000313|EMBL:ENY92524.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Aluminum resistance family protein
L3_133_000G1_scaffold_3_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12396..13373)
DNA (978bp) protein (326aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9D2_9CLOT
L3_133_000G1_scaffold_3_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13370..15547)
DNA (2178bp) protein (726aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9Z8_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
DNA mismatch repair protein MutL
L3_133_000G1_scaffold_3_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15571..18225)
DNA (2655bp) protein (885aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VP97_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
DNA mismatch repair protein MutS
L3_133_000G1_scaffold_3_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18252..19697)
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPV9_9CLOT
MiaB family RNA modification protein
L3_133_000G1_scaffold_3_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19955..21208)
DNA (1254bp) protein (418aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9C5_9CLOT
L3_133_000G1_scaffold_3_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21261..21797)
DNA (537bp) protein (179aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WYD0_9CLOT
5-formyltetrahydrofolate cyclo-ligase
L3_133_000G1_scaffold_3_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21781..22002)
DNA (222bp) protein (74aa)
UPF0291 protein HMPREF1093_04243 n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9Z4_9CLOT
UPF0291 protein HMPREF1093_04243 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_3_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22014..22877)
DNA (864bp) protein (288aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Glutamate 5-kinase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VP91_9CLOT
glutamate 5-kinase
L3_133_000G1_scaffold_3_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22978..24627)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92514.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
FAD dependent oxidoreductase
L3_133_000G1_scaffold_3_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24570..25790)
DNA (1221bp) protein (407aa)
HI0933 family flavoprotein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9B7_9CLOT
HI0933 family flavoprotein {ECO:0000313|EMBL:ENY92513.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_3_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25922..26308)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WYC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92512.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_3_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26360..27943)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9Y9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92511.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
virulence factor MVIN family protein
L3_133_000G1_scaffold_3_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28035..29189)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VP86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92510.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_133_000G1_scaffold_3_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29186..29683)
DNA (498bp) protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Endoribonuclease YbeY n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPU9_9CLOT
hypothetical protein
L3_133_000G1_scaffold_3_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29667..30698)
DNA (1032bp) protein (344aa)
Phosphate starvation-inducible protein PhoH n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9B1_9CLOT
Phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:ENY92508.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
PhoH family protein
L3_133_000G1_scaffold_3_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30685..31932)
DNA (1248bp) protein (416aa)
Sporulation protein YqfD n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WYC0_9CLOT
Sporulation protein YqfD {ECO:0000313|EMBL:ENY92507.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sporulation protein YqfD
Displaying items 1-30 of 266 in total

View Taxonomy